Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0565 |
Symbol | |
ID | 4600608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 513992 |
End bp | 515407 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639773336 |
Product | hypothetical protein |
Protein accession | YP_919974 |
Protein GI | 119719479 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTGAAA GGTACATGAG GGGAAATGGA GCGGGGGAGG GGTTTGAAGA GTTCGACGAG TGGTTTATTC GCAGGAAGAT CGAGGAGCTT CTCAGGAGGG CGCTGTTTCC GCCCAGCGGC TACAGGGGGC TCAAAGCTAC CCATGAAGAG GTCGCACAGG AGCTAGCGGA GATAAGGGGC AACTATGCGC AATACGGCGA GGCCTACGTT GAATACGTTG GCAGGCTCGG GGAAGGCGAG GAGAAGGCGT TCAGAGAGGC GGAGAAAGCG ATGAGGGAAG CCCTGAAGCG TGTAGACGAA CTCAAGATCA AGAGAACGGG GAAGACACGG TGGAAGGCTA AGCTTCCAGG AGAGAAATGG CGGATCTACG TGTCTAGGAA GCCTAACGGG TACTGGAGTG TCGAGGTCGT CCTTCTCCTT AAGATCGCTA GACTAAGACT TCCCGACGTC CTGGAGCTTT CGCCTGAATT GCTGGTGGCA GCTCAAACGG GTTGGATCCT TGGTGATGCG TCGTACATCG CAGACCACGG AAGAGTCGAT ATGGCTACGG CGCAGAGCTG GCAGGTTGCC TCCTTCCCCG GTTTCTGGCC GGGGAAGGAG GTGACTGTCT ACGTTAGAAG CATAGTAATC AACGAGACTC GCGTCAGCAT GGTGTGGTTT ATCTATGTAC ACGGCGTCCG CGACGCGCCT AGGGAGTGGG CTTTGAGGAA GGAGGAGAAG CAGGGTATTA TCTTGGCGGA GATCGAGGCG GCGAACGAAG GAAAAGTCGA CATCGTCAGG GCGCTAAAGC TCGCACTGCT CTACGTTACA GATGGTGAGT ACCCAGGGTC AAGCAACACG GGTAAACATC TGTTACAATT TGCAGTCGGT CAAAGATCTC GCCAAGTTAG AACCGAAGGT GCGGTGAGGG TTGCGAGGCT TCTCTACGAG AAAGTGCCGC AACTACTGGA ATACATGGCT GCGTCTGGTT GCCAGAAGGC AGAATTCTTA GCGAGCCTGG CATCCGTGAA GCCGCGACAC TACGCGCCTC GCTACCTGGA GGTGTGCGGT GTTAAAATGA ACCTGCGGCT CGCAGGCCCT AAGAACCGCC GCTACCTTAT GGCCCAAGTA TACATCACGC GCAATAACGA GGAGATGCTT CGCGATTTCC CCGAGAGGGC GAGGCGCGAG GGTCTAGAAG TCAGAAGGGT GAAGGTGAGT AAGAGGTATT GGGGTTACCG TGCTGGCGAA AAATCGCTAA TGAAGTATGC TGACCGATAC CCGCGCGTCT ACGACACCTT GATCGCGTTT GTCCAAGAAG AGCTTGAAGC AATGCCTCTT GACCACCCGG CAAGGCCAAG CGTGGAGCGC CTCTTGGAAC GCCTAAGGAA GGCGCGAGAA AGAGCGCTTA AAAAGCTGGG GGCAAGGCAG GAATAG
|
Protein sequence | MVERYMRGNG AGEGFEEFDE WFIRRKIEEL LRRALFPPSG YRGLKATHEE VAQELAEIRG NYAQYGEAYV EYVGRLGEGE EKAFREAEKA MREALKRVDE LKIKRTGKTR WKAKLPGEKW RIYVSRKPNG YWSVEVVLLL KIARLRLPDV LELSPELLVA AQTGWILGDA SYIADHGRVD MATAQSWQVA SFPGFWPGKE VTVYVRSIVI NETRVSMVWF IYVHGVRDAP REWALRKEEK QGIILAEIEA ANEGKVDIVR ALKLALLYVT DGEYPGSSNT GKHLLQFAVG QRSRQVRTEG AVRVARLLYE KVPQLLEYMA ASGCQKAEFL ASLASVKPRH YAPRYLEVCG VKMNLRLAGP KNRRYLMAQV YITRNNEEML RDFPERARRE GLEVRRVKVS KRYWGYRAGE KSLMKYADRY PRVYDTLIAF VQEELEAMPL DHPARPSVER LLERLRKARE RALKKLGARQ E
|
| |