Gene Tpen_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0557 
Symbol 
ID4600521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp505633 
End bp506331 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content59% 
IMG OID639773328 
Productribosome biogenesis protein 
Protein accessionYP_919966 
Protein GI119719471 
COG category[S] Function unknown 
COG ID[COG1756] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGT TGGTCCTAGT ATTGGCGGAC GCCGGGCTAG AGCTGGTACC GAGGGAGCTC 
TGGAGCCACC CAGCCGTGAA GAGCCATGCG AAGCGGCGCG GCAAAAACCC AGGAAGGATG 
CTGCTGGACA TCTCGGTGCA CTACGCGGCG ATGAAGACGC TTAACGAGTA CTGGAAGAGG 
GGTCGACCGG ACATAGTGCA CGTTTCCCTC CTGGTGGCCC AGGACTCCGT GCTCAACAGG 
CTAGGCTACC TGCATACCGT TATACACACG TACGACGGTA AGCTCGTCGA ACTGGACCCC 
AGCATGGTGG TTCCGAGGAA CTACAACAGG TTCGTGGGGC TTTTCGAACA ACTACTAGAG 
AAGGGACAGG TACCGCCGGG CTCCGAGAAG CCTCTCGCGA AGCTACGCAC GGGGAGAAAC 
CTCGGCGAAG TTTTGAAAGA GATGGGTGTG GACGCCGTGT ACAGGCTTAG CGAGAAAGGC 
GAGCCCGTAA AGCCCTTAGA CCTCGCTAGG AGGATTGCCG GCTCAGACGT GCCGGCCGTG 
ATAATAGGAG CATTCCAGAG GGGGGAGTTC AGCAAGGAAG TGCTCAGCAT CGAAGCAGAG 
GAGTACTCCA TATTCCGCGA AGCCCTCCCC GCGTGGACGG TGGTCGCGGA GGTTGTAGTC 
TCGCTAGAAC ACGTATCGGT GTGGGGTGCC TCGCATTGA
 
Protein sequence
MKKLVLVLAD AGLELVPREL WSHPAVKSHA KRRGKNPGRM LLDISVHYAA MKTLNEYWKR 
GRPDIVHVSL LVAQDSVLNR LGYLHTVIHT YDGKLVELDP SMVVPRNYNR FVGLFEQLLE 
KGQVPPGSEK PLAKLRTGRN LGEVLKEMGV DAVYRLSEKG EPVKPLDLAR RIAGSDVPAV 
IIGAFQRGEF SKEVLSIEAE EYSIFREALP AWTVVAEVVV SLEHVSVWGA SH