Gene Tpen_0547 details

Gene Information

• Locus tag: Tpen_0547
• ID: 4600504
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 497077
• End bp: 497784
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 639773318
• Product: hypothetical protein
• Protein accession: YP_919956
• Protein GI: 119719461
• COG category: [S] Function unknown
• COG ID: [COG4879] Uncharacterized protein conserved in archaea

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAGGAGG TTCATAGGAA GCGAATAGAA GTAGCGATAA ATGTATGGGG GGAAATTCTC 
GAGAAAACCT TTGAGAACAG GGAGCAACTG GTCTCCTACC TCGAGGCTGT GTACAGGGAG 
AATAGACTCG AGCCCATACG CGGGAAGACC CGTATAAACA TCTATGATAA AGAGCTTGCC 
ACGCTGTACC TCGTGGGCAA GTACGGTCTA GCACTGGAAG ACGAGATTTC TAGCTTCTCC 
GACCTCTTCC ACGTTGAGAT AAAGGCGGAC AAGGTTCTAT CGAGGGTTCT CTCCGGCGAG 
GATCCGAGGA ACGCCGTGGT TTCAGAGTTC GGTTCAACAG AGGAGGATAA CGTCTTTAGG 
GTTTTACGCC TAGCAATGAC CGCGGTAGTT CTGGGATTCA TGGACGAAGA GACCTTCATC 
AGGGTGCTCG AGTCGTTTGA AAAAGCTTTC CCAGAGCTGG ACCGCAACTT TACAAGTTTT 
AAGCGGTTCT ACATAGCTTT CAGGCTAGCT GAGAAGATAG CGGCGGGAGA AATAAGGAAT 
AGGCTGGAGA AAGAGGCCTA TAAACATGCG CTGTGCGTAA AGCTGAACGC CGAGAAAGCG 
GCACCTCCGG ACTCGTTTAT ACGTGACATA GCAGTGAATG CGCTTAAGGT GCCAGAGTTC 
AAGGTCAACA GCGCGTTGAG CCTACACGCG CACGAAAGAA GTTCTTGA 

 

Protein sequence

MQEVHRKRIE VAINVWGEIL EKTFENREQL VSYLEAVYRE NRLEPIRGKT RINIYDKELA 
TLYLVGKYGL ALEDEISSFS DLFHVEIKAD KVLSRVLSGE DPRNAVVSEF GSTEEDNVFR 
VLRLAMTAVV LGFMDEETFI RVLESFEKAF PELDRNFTSF KRFYIAFRLA EKIAAGEIRN 
RLEKEAYKHA LCVKLNAEKA APPDSFIRDI AVNALKVPEF KVNSALSLHA HERSS