Gene Tpen_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0542 
Symbol 
ID4600499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp491829 
End bp492995 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content61% 
IMG OID639773313 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 
Protein accessionYP_919951 
Protein GI119719456 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACG GGGGAAAGAG GATACTCTTA ACGGGTAACT ACGCTGCCGC CTACGCCGCT 
AGGGACGCGG ACCCCGACGT CGTCTCCGCG TACCCCATCA CTCCTCAGAC CCCCGTTATC
GAGAAGATAG CCGACTTCAT AGCATCGGGA GAGCTAAACG CGAAGTTTGT ACGCGTAGAG
TCGGAGCACA GTGCGATGGC GGCACTGATA GGAGCTGCGA GCGCGGGGGC CAGGACGTAC
ACGGCGACTT CCAGCCAGGG TCTTTTCTAC ATGTACGAGG TGGTATGGTG GGCGGCGGGA
GCCAGGTTGC CCATAGTGAT GGGCATAGTT ACGCGCGCTC TTGGACCTCC CTGGAACATT
TGGAGCGAAC ACTCGGACTT CTACGCCATA AGGGATAGCG GCTGGAACAT GTTCTTCGCG
TCGAGCGCAC AGGAGGTTTA CGACTTGACG CTGATCTCGT ACGGCGTCTC CGAGAATCCC
GACGTGTTGC TTCCCTCCGC GGTCGGCTGG GACGCCTTCG AAGTGAGTCA TACGTACGAG
CCTGTCCACG TGCTTGGGAG GGAGGAGGCA TCAAAAATCC TGCCTCCCAA GGGTGCCTGG
AAGCCGCCGC TGACGCCCGA GGATCCCTCC TCTCTCGGGA ACCTAGCCTA CCCGGAGGAG
TACGCGGAGG TCAGGCGGAC CCTGAGGGAG GCCTCCGAGA AAGCCCTCGG AGTGTTCAGA
GAGGTTGCAA CCAGGTACTC GAGGATCACG GGGAGGAACT ACGCGGGGCT CTACGAGTGC
TACAGGTGCG TCGACGCGGA CGCGCTTATA ATAGGGATGG GCTCCATAAT AGGGGAGGTC
TACAGGGCTG TCGATCTCCT CAGGGAGAGG GGCGAGAGGG TTGGAGCTCT AAAGCTCTGG
GTCTACAGGC CTTTCCCATA CGAGGAAGTC GCCAGGAGGC TGGAAAACGT CAAGCTCGTA
GTAACCGTAG CGAGAGCCTC CGTGTTTGGT AGCCTCTCCC CCCTCGGCTT AGACGTTGCC
TCGGCGATCA CGCTAGGAGG TCTCGACGTG AAGCTCGTGG ACTACGCGGC GGGCGTCGGC
GGAGTGGACG TCTACGCGGA GGACGTGGTG GGGATGTACG AAAAGGCTAA GGCTTCGAGA
AGCGGGGGTT TCTGGTGGGT GAGGTGA
 
Protein sequence
MSDGGKRILL TGNYAAAYAA RDADPDVVSA YPITPQTPVI EKIADFIASG ELNAKFVRVE 
SEHSAMAALI GAASAGARTY TATSSQGLFY MYEVVWWAAG ARLPIVMGIV TRALGPPWNI
WSEHSDFYAI RDSGWNMFFA SSAQEVYDLT LISYGVSENP DVLLPSAVGW DAFEVSHTYE
PVHVLGREEA SKILPPKGAW KPPLTPEDPS SLGNLAYPEE YAEVRRTLRE ASEKALGVFR
EVATRYSRIT GRNYAGLYEC YRCVDADALI IGMGSIIGEV YRAVDLLRER GERVGALKLW
VYRPFPYEEV ARRLENVKLV VTVARASVFG SLSPLGLDVA SAITLGGLDV KLVDYAAGVG
GVDVYAEDVV GMYEKAKASR SGGFWWVR