| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0539 |
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| Symbol | |
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| ID | 4601053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 489640 |
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| End bp | 490974 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639773310 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_919948 |
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| Protein GI | 119719453 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type
[TIGR00707] acetylornithine and succinylornithine aminotransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGGAC CGAAAATAAT CGTTGAGCCT CCGGGACCTA ACTCTAGGAA GATCGCCGAA
AAGGACTCCG CACTGTTGAT GCAGAGCTTC GCGCGCTGGT ACCCCTTGGT CGCCAAGCGC
GCACACGGCG TGTGGGTCGA AGACGTCGAC GGAAACGTCT ACCTGGACTT CAACTCCGGG
ATAGGCGTGA CGAACACGGG GCACTGCCAC CCTAAAGTCG TCAAAGCGAT AAAAGAACAA
GCAGAGAGGC TACTTCACTA CTCTTTGACG GACTTCCTCT ACGAGGAGCC CGTCAAACTC
GCCGAGAAGC TTGTATCGAT AACTCCGGGA CGCTTCCCGA AGAAGGTGTT CTACACGAAC
AGCGGAACGG AGTCCATAGA GGCAGCAATA AAGACTGCAA GAGGGCATTT CAGGGGCACG
CGGCCCTACA TAATCGCATT TGCCGGCTCG TTCCACGGGC GAACGTACGG GTCCCTCTCC
CTCACGAGTA GCAAGCCAGT ACAGAGAAGA CACCTAGGCC CGCTACTACC CGGCGTGTTC
CACGCACCCT ATCCATACTG TTACAGGTGC CCCTTCAGGC AGAAGTACCC TGAATGCAAC
CTTTGGTGCG TCGACTTCAT CGAAGAGTGG ATGCTCAAGA AGTACGTACC CCCAGAGGAG
GTCGCCGCAT TCGTCGTAGA GCCGATAGCG GGGGAAGGCG GCTACATAGT ACCGCCGCCC
GAGTTCTTTA AGAGGCTACG CGAGCTAGCG GACAAGTACG GAATACTCCT GGTGGTAGAC
GAGGTCCAGA GCGGATTCGG GAGAACCGGG AAGTGGTTCG CGATAGAGCA CTTCGGAGTG
GAACCCGACA TAATAGCCGT AGCCAAGGGG ATAGCTTCGG GGCTCCCGCT GGGCGCGATA
ATAGGTAGGG CGGAAGTCAT GGACCTACCT CCGGGCTCCC ACGCCTCCAC CTTCGGAGGA
AACCCCGTCA GCTGCGCCGC AGCTCTCGCA ACGATCGAGG TAATAGAGGA GGAAAAACTC
CTGGACAACG CGACGAGAGT AGGTGAATAC GCGATGAAGA GGCTACGCGA GCTACAGGAG
GAAATACCCT ATATAGGAGA CGTGCGTGGG AAAGGGCTCA TGATAGGCGT AGAGCTCATC
GCGAGAGACG GTTCCCCGAA CCCAAAGCTC CTGCAGAAAA CGCTCGAGAT AGCTTTCAAG
AAAGGCCTGC TCGTGATAGG AGCCGGGGTG AGCACTATCC GGATAGCCCC GCCCCTGATA
ATAACCCAGC AAGAAATGGA GACCGGGCTA CGCATACTAG AAGAATCCTT GAGGGAAGCT
TTAAAAGAGG TCTAA
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| Protein sequence | MNGPKIIVEP PGPNSRKIAE KDSALLMQSF ARWYPLVAKR AHGVWVEDVD GNVYLDFNSG
IGVTNTGHCH PKVVKAIKEQ AERLLHYSLT DFLYEEPVKL AEKLVSITPG RFPKKVFYTN
SGTESIEAAI KTARGHFRGT RPYIIAFAGS FHGRTYGSLS LTSSKPVQRR HLGPLLPGVF
HAPYPYCYRC PFRQKYPECN LWCVDFIEEW MLKKYVPPEE VAAFVVEPIA GEGGYIVPPP
EFFKRLRELA DKYGILLVVD EVQSGFGRTG KWFAIEHFGV EPDIIAVAKG IASGLPLGAI
IGRAEVMDLP PGSHASTFGG NPVSCAAALA TIEVIEEEKL LDNATRVGEY AMKRLRELQE
EIPYIGDVRG KGLMIGVELI ARDGSPNPKL LQKTLEIAFK KGLLVIGAGV STIRIAPPLI
ITQQEMETGL RILEESLREA LKEV
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