| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0517 |
|---|
| Symbol | |
|---|
| ID | 4601355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 469827 |
|---|
| End bp | 470711 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639773286 |
|---|
| Product | succinyl-CoA synthetase, alpha subunit |
|---|
| Protein accession | YP_919926 |
|---|
| Protein GI | 119719431 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATAC TCGTAGACGA GAAAACCCGC GTGCTCGTAC AGGGGATCAC CGGCAAGCAG
GGAATGCTCC ATACCGAGCA AATGCTACGC TACGGAACGC GGATTGTTGC CGGTGTAACC
CCGGGAAAAG GTGGCTCCAC GATAGTCGGC GTACCCGTTT ACAACACGGT GGCGGAGGCA
GTGGATAAGC ACCCGGAGAT AAATACCTCT ATAGTATTCG TCCCCGCCCC CTATGCGCCC
GACGCCGTTT ACGAGGCTCT CGACGCCGGT ATAAAGAAGG TGGTCGTCAT AACGGAGCAC
ATACCCGTTC ACGAGACCAT AGAATTCGTG AGGTATGCGC TGAGCAAGCA GGCGGTAATC
ATAGGCCCAA ACACGCCCGG CGTGATATCG CCTGGAAAGT CCAAGGTGGG TATAATGCCC
GGGGAGTACT TTAAGCCGGG TAACGTGGGT GTAGTCTCGC GAAGTGGAAC GCTCACGTAC
GAGGTTTCCC TGAGGCTTCT CGCTAGCGGT TTCGGCGTAT CCACAGCTGT TGGGATAGGA
GGAGACCCCG TCACCGGCCT ATCCTTCGAA GATGTCTACG AGTTATTCGC GCGCGACGAT
GAAACAAGGC TCGTGGTTCT CGTCGGCGAG ATAGGCGGGA CAAAAGAAGA GAGATTCGCG
GAGTACTACG CTAAGCTCTC CTCGAAAAAA CCCGTTGTAG CGTTCATAGC TGGTAAATCC
GCCCCGCCTG GACGCAAAAT GGGGCATGCC GGCGCGATAG TCTTCGGCTC GGAAGGTTCC
TACGAAAGTA AGGTTAACGC GCTGAGAAGA AGCGGTATCT ACGTCGCCCA GAGCCTAAGG
GAGATCGCGG AGATCGTGGC GCGTGTACTG TCTACGCCTC GATAA
|
|---|
| Protein sequence | MAILVDEKTR VLVQGITGKQ GMLHTEQMLR YGTRIVAGVT PGKGGSTIVG VPVYNTVAEA
VDKHPEINTS IVFVPAPYAP DAVYEALDAG IKKVVVITEH IPVHETIEFV RYALSKQAVI
IGPNTPGVIS PGKSKVGIMP GEYFKPGNVG VVSRSGTLTY EVSLRLLASG FGVSTAVGIG
GDPVTGLSFE DVYELFARDD ETRLVVLVGE IGGTKEERFA EYYAKLSSKK PVVAFIAGKS
APPGRKMGHA GAIVFGSEGS YESKVNALRR SGIYVAQSLR EIAEIVARVL STPR
|
|---|
| |