| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0512 |
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| Symbol | |
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| ID | 4601350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 465262 |
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| End bp | 465855 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639773281 |
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| Product | putative RNA-processing protein |
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| Protein accession | YP_919921 |
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| Protein GI | 119719426 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1094] Predicted RNA-binding protein (contains KH domains) |
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| TIGRFAM ID | [TIGR03665] arCOG04150 universal archaeal KH domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGG AGGGGCAGGG TGTAAGCCCT CGCGGGAAGC TCCCAGTACC GGTTGAGCAG
TCAAGGATAG GCTACATTAT AGGGAAAGAT GGGTCCAATA AACGTCGATT GGAGGAAACC
TTTAACGTAA AGCTGGACGT GGACTCTGCG ACCGGAGTCG TGTACGTTGA GCCTGGCGAG
GGTGCAACCC CTTACAACGT TTTCAGGGCT AAAAAAGCCC TGGAAGCAAT ATCGATAGGC
TTTACGGTCG ACGACGCGTT GCTGCTGGGG GACGATGCTT ACGACCTAGA GGTTATCGAC
CTGTCCGAGG TTTCCAAGCG TCGCGAGGAT CTCTCGAGAA TTAAGGCTAG AATTATAGGA
ACAGAGGGGC GCTTTAAAAA GACCCTCGAA GACATGACTG GGGCTAGGAT CGTTATAGGC
GAGAAAGCCG TGGGTATTAT CGGAGACTTC GAGCAAAACA AGGTCGTAAA GGAAGCACTC
GAAAGGCTAA TCGCCGGTCA GAGCCACCAG AGCGTTATGA AGTTTCTCGA AAGGATGAGC
TTCGAGCTTA AGCGCAGGAG GACCCAGCTA TGGGAGCGAA TGCAGGGAAT GTGA
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| Protein sequence | MPEEGQGVSP RGKLPVPVEQ SRIGYIIGKD GSNKRRLEET FNVKLDVDSA TGVVYVEPGE
GATPYNVFRA KKALEAISIG FTVDDALLLG DDAYDLEVID LSEVSKRRED LSRIKARIIG
TEGRFKKTLE DMTGARIVIG EKAVGIIGDF EQNKVVKEAL ERLIAGQSHQ SVMKFLERMS
FELKRRRTQL WERMQGM
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