Gene Tpen_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0505 
Symbol 
ID4601000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp460072 
End bp460434 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content47% 
IMG OID639773272 
Producttranslation initiation factor SUI1 
Protein accessionYP_919915 
Protein GI119719420 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic
[TIGR01160] translation initiation factor SUI1, eukaryotic 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.583781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATGCAT TCCACGCGCG CGACGAAATG TTTATAAACA GGCACGTTGA AGAATCCATT 
CAGACACGGG AGACAATGAG CGCGGAGCTA TTAGATAACA TATTAAAGGG AGTGTTCAAG 
GAGCAACAGC TGATCAAGAT TCGCGTAGAG AAGCGCAAGG GTCACAGAGA CGTTACCATT 
ATAACGGGCC TCGATGTTAA AGATCCAGAG CTTCGAAGAA TGGTCTCGGA GATGAAGGCA 
AAGTTTGCCT GCGGAGGTAC AATAAAGGAT GACCACGTAG AGCTACAGGG AGACCATAGG 
TACAAAGTTA AAGAGTTTCT AGTGCTCAAC GGTTTTCCGG AGAGCAACAT AGTCGTCGAG 
TAA
 
Protein sequence
MDAFHARDEM FINRHVEESI QTRETMSAEL LDNILKGVFK EQQLIKIRVE KRKGHRDVTI 
ITGLDVKDPE LRRMVSEMKA KFACGGTIKD DHVELQGDHR YKVKEFLVLN GFPESNIVVE