Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0504 |
Symbol | |
ID | 4601338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 459562 |
End bp | 460020 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639773271 |
Product | heat shock protein Hsp20 |
Protein accession | YP_919914 |
Protein GI | 119719419 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.5396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATG ATACTGGTAA GGTTGCCGCT GAGCTGGCAG AAGCTATTGC TAGAATACAG AAAGAGCTGA ACGATTCACT GAGGGAGATA TGGGCGAAGC ACTTCGCGTT ATACCCGGAC AAGCTTAGAA TGCTGGATCC GCTCTACGAT ATAGAGGATA GGGGCGACTC CTTAGCTGTC TACGTGGATT TGCCGGGCTT CCGGAAAAAC GAGATCAAGA TAAGGGTTAC CGAAGACTCT CTGGAAGTTT TCGCGGAGAA GAGCGAGGAA AGAGTTAAGG ATGAGGATTC TAGGAAGTAC ATTCAAAGGC AAAGGCTTTA CAAGCAGGTT TACAAGAAGA TCTCGCTACC GGTTAAGGTG AGGCCCGAGC AGGCTCGTGC AAGGTTTGAG GACGGAGTGC TCGTGGTGCT TGTACCCAAG AGTGGCGCCG AGAAGGAAGT AGAAGTAAAG GTAGAGTAG
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Protein sequence | MSDDTGKVAA ELAEAIARIQ KELNDSLREI WAKHFALYPD KLRMLDPLYD IEDRGDSLAV YVDLPGFRKN EIKIRVTEDS LEVFAEKSEE RVKDEDSRKY IQRQRLYKQV YKKISLPVKV RPEQARARFE DGVLVVLVPK SGAEKEVEVK VE
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