| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0498 |
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| Symbol | |
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| ID | 4601332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 450483 |
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| End bp | 452702 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639773265 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_919908 |
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| Protein GI | 119719413 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCAA CGAGAGCTGT GCTGTCAAGG TACTTCCCCG ATGAGGTTGT CCGTAAGATA
GAGGAGCGCT TCAACATAAA GACACTCTAC CCAACACAGG TAGCAGCGGT TGAGAAAGGT
GTCCTAGACG GGAAAAACAT CGTTCTAAGC GCTCCCACAG CTTCAGGGAA GACCCTGGTG
GCAGAGCTCG CCGCACTTAA ACACCTTTTA AACGGAGGAA AGGTGCTCTA CCTTGCACCC
TTAAGGGCTC TCGCCTCGGA GAAGTTCAAA GAGTTCAAAG AGTTCTTCGG GGAGTTTGGC
TATAGGTCTG TTCTAAGCAC AGGAGACTAC GACACGGCAG ACCCCTCGCT GGGTAAATAC
GACGTGATAG TGACTACGAA CGAGAAGGCT GACAGCCTCC TGCGCCATAG CGCGCCCTGG
TTTCCCGACG TAACTTTAGT GATAGCAGAC GAGGTTCACC TGCTTGGCTC GGAGAAACGT
GGGGCGACGC TCGAAGTCCT GCTTACGCGT ATACTTCTGA GCGAGGATCC TCCGCAGATC
CTGGGCCTGA GTGCGACTAT AGGGAACCTT GAGGAGGTGG CAAGATGGCT GAACGCTACA
CCCGTGAGCG TGGAGTGGCG CCCAGTCCTC CTAAGGGAAG GAGTATACTA CGATGGAACA
ATATTCTACG CTGATGGAGC GTCGAGGAGC GTCGAGGACG TGGGCTCGGC TCTCGCGAAC
CTTGTTCACG ACGTGTTAAG AGAGGAAGGG CAAGCCCTAG TATTTTCGCC TACGCGGAGA
GCCGCCAGCA GCGACGCCAA AAAGCTGTCC GTATATACAC GGAAGTTCCT TCGAGACTCG
GAGAGGCGAC ACTTAAAAGA GGCAGCGCGC AAGGTGCTCT CGTCCCACGC CGACAAATTA
ACGAACGAGC TGGCAGAGCT CATGCTTCAT GGAGTCGCAT TTCACCATGC GGGACTCTCC
GGAGATGCCA GGGAGACTGT TGAACAGCTT TTCCGGGAAG GCTTCCTGAA GACTGTTGTC
GCTACACCCA CTCTAGCTGC AGGAGTGAAT CTACCGGCAA GGCGAGTAAT CATAACGGAT
TACCGCAGGT ATAACGTAGA GCTGGGCTAC CACGAAAGCA TCCCGGTCAT GGAGTACAAA
CAGATGGCTG GGCGCGCCGG GAGGCCTCAG TACGACAGGG AGGGCGAAGC CATTTTAATA
GCGCGTAACA TGGAAGAGGT GGAGTTCCTT TTCAAAAGGT ACGTCTACTC TGCACCCGAG
ACCCTTCAGT CCCAACTAGG CTCCGAGCCT GTCCTCAGAG CGCAGGTTCT AGCTGTAATC
TCGACTGAAA GCAGGATTAA AACTACGGAG GATCTGGACA GGTTCCTGGA GAGAACGTTC
TTCGCTTTAA AGTTCGGTAC CTTCAGCCTT AGTACTCTTT CGAGAAAAGT TTTGCGAAGG
CTCGTGGAGG GAGGATTGGT GGAACTTAAC GGGGAAGCTT TGAAGCCGAC GTTCCTTGGA
CGCCGTGTGG CTGAACTCTA CATAGACCCT GAAACGGCGC TGGAAGGGTT AAGGTTCTTT
AACTCAACGC CCGCCTCCTC GGAGCTAGCG TACCTCTTCC TGGTTTCGAA GACGCCAGAC
ATGGTTACGC TCAGCGTTAG AAGGAGCGAC TACGAATTTT TAGAGACGGA GCTAGAAAAC
AGGAAAAACG AGATACCTTA CCAGGTCCCG GAAGACGAGA TAGAGTACGA ATTCTTCCTG
TCGTACCTCA AAACAGCCCT CCTTCTCAGC GACTGGATCA ACGAGGTTCC AGAAGATGTT
ATCGTTGAAA AGTACGACGT GGGCCCGGGC GACATATACT CCATGACGCA GACCGCCGAG
TGGATAGCGT ATTCTCTCTC GCAGATAGCC GACGTAACGG GCCATAAGGA GCACTCCTCC
AGGCTTGGGG TCCTAAGCAA GAGGATCGCT CACGGAGTGA AGGAAGAACT ACTGGAGCTC
GTCTCGCTGA GAGGTATTGG ACGCGTGAGA GCCAGGAGGC TATACGAGCA CGGCTACAAG
TCCCTCGTAG ACCTTATACT CGCCGATGAG CGCGACCTTA CGAGGATCCC GGGGATAGGA
CCCAACCTCG CGCGCTCCAT AAAGCGGCAA CTAGGCGCGG TGGGAGAGAA AGAGGAGGAA
AATGAAGAAG ATTACGGGCC GGTGGAAGAG GGTCAGCTCA ACCTAGACTC GTACCTGTAG
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| Protein sequence | MKPTRAVLSR YFPDEVVRKI EERFNIKTLY PTQVAAVEKG VLDGKNIVLS APTASGKTLV
AELAALKHLL NGGKVLYLAP LRALASEKFK EFKEFFGEFG YRSVLSTGDY DTADPSLGKY
DVIVTTNEKA DSLLRHSAPW FPDVTLVIAD EVHLLGSEKR GATLEVLLTR ILLSEDPPQI
LGLSATIGNL EEVARWLNAT PVSVEWRPVL LREGVYYDGT IFYADGASRS VEDVGSALAN
LVHDVLREEG QALVFSPTRR AASSDAKKLS VYTRKFLRDS ERRHLKEAAR KVLSSHADKL
TNELAELMLH GVAFHHAGLS GDARETVEQL FREGFLKTVV ATPTLAAGVN LPARRVIITD
YRRYNVELGY HESIPVMEYK QMAGRAGRPQ YDREGEAILI ARNMEEVEFL FKRYVYSAPE
TLQSQLGSEP VLRAQVLAVI STESRIKTTE DLDRFLERTF FALKFGTFSL STLSRKVLRR
LVEGGLVELN GEALKPTFLG RRVAELYIDP ETALEGLRFF NSTPASSELA YLFLVSKTPD
MVTLSVRRSD YEFLETELEN RKNEIPYQVP EDEIEYEFFL SYLKTALLLS DWINEVPEDV
IVEKYDVGPG DIYSMTQTAE WIAYSLSQIA DVTGHKEHSS RLGVLSKRIA HGVKEELLEL
VSLRGIGRVR ARRLYEHGYK SLVDLILADE RDLTRIPGIG PNLARSIKRQ LGAVGEKEEE
NEEDYGPVEE GQLNLDSYL
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