| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0494 |
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| Symbol | |
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| ID | 4601328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 446208 |
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| End bp | 447377 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639773261 |
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| Product | Fmu (Sun) domain-containing protein |
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| Protein accession | YP_919904 |
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| Protein GI | 119719409 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.201395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTAGCG TTGGTGCAGT AGCGTCTAGG TATGGTTACA GGGTTGACTT CGTGGAGTAC
CTTGCGCGTT TTTTCAGCCT AGGCTACATC GAGGATCTCT TTAGGAGCTT GGAGACTCCG
GGATCCAGGT ATTTCTTCAG AGTTAACACG CTGAAGGTAC GTCCGGAGGA CCTTCTCGAA
GAGCTCCGCG AAGAGGGGTT GAAGGTATAC AGGCATGATC GTTTACCGGA GGCTTTCTAC
GTGCCAGTAG AGGGGCCTTT CGAGGTCAGA CTGCTACCTG GAAAGGTCTA TGTCGATAAA
AAGACGGCGG AAAGCGTGTA CGTGGGTGCC AACGTATTCG CACCCGGAGT CACGAAAGTA
GAGAACGCGA GGGAGGGGGA CCTTGTATCC GTGATTGCCC CTGGAGGACG TGTAGTTGCA
GAGGGAGTTT TGTCTATGGA TCCTTCCAGG GTGTTCTCGG AACGCAAAGG GCTCGCCGTA
AGGGTTGTGA GGTCTGTTTA TAGGGCTGTA TCGCTCCGCG AGACTAGGTA CTTTGACGAG
GGGCTAATCT ACCATCAATC TTTACCCTCT ATGGTGGCTG TACGCCTGCT AGACCCTCAG
CCCGGCTGGA CGGTGCTTGA TATGTGTGCC GCTCCAGGTG GGAAGACTAC GCATGCGGCA
CAACTGATGG GCGACCACGG GGAGGTTATC GCTGTTGACA GGACGAAGTC GAAGGTTGAT
ACGATAATGG AGCATGCGAG AAGGCTGGGG CTTAAGTCCG TGAAAGGGCT TGTTTACGAT
AGCCGTTACA TATCGGAGTA CTTGGACAAG GATAGCGTAG ATGCAGTTAT AATTGATCCT
CCCTGCACGG CGCTCGGAGT TCGCCCGAAG CTGTGGTACG AGAGAGGCTT TGACGACGTG
TTGAAGCTAT CAGATTACCA GAGACAGTTC CTCAGAGAGG CCGCCAAAGT TCTGCGTAGG
GGTGGGCGCT TGCTATTCAC TACGTGCACT ATATCGCCTT ACGAAAACGA GTTCAACGTC
ATATTCGCGG CTTCGTATCT AGGACTAAAG CCTTTACCCC TGAGCTTTCC CCCCGTAAAG
AGCGGCTTAC TGGGCACGGG TTCCCTACAG TTCGTGCCTC ACGAACACGA CACCCCGGGG
TTCTTCATAG CACTCTTCGA AAAACGTTAG
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| Protein sequence | MSSVGAVASR YGYRVDFVEY LARFFSLGYI EDLFRSLETP GSRYFFRVNT LKVRPEDLLE
ELREEGLKVY RHDRLPEAFY VPVEGPFEVR LLPGKVYVDK KTAESVYVGA NVFAPGVTKV
ENAREGDLVS VIAPGGRVVA EGVLSMDPSR VFSERKGLAV RVVRSVYRAV SLRETRYFDE
GLIYHQSLPS MVAVRLLDPQ PGWTVLDMCA APGGKTTHAA QLMGDHGEVI AVDRTKSKVD
TIMEHARRLG LKSVKGLVYD SRYISEYLDK DSVDAVIIDP PCTALGVRPK LWYERGFDDV
LKLSDYQRQF LREAAKVLRR GGRLLFTTCT ISPYENEFNV IFAASYLGLK PLPLSFPPVK
SGLLGTGSLQ FVPHEHDTPG FFIALFEKR
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