Gene Tpen_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0486 
Symbol 
ID4601784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp442031 
End bp442315 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content51% 
IMG OID639773254 
Productribonuclease P, Rpp29 
Protein accessionYP_919897 
Protein GI119719402 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1588] RNase P/RNase MRP subunit p29 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.981553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAA CTCCGAAGAA CATACTCCGG CACGAGCTTA TAGGTCTTGA AGCCTGCGTC 
GTTAAGTCGA AAAACCCCAG TCAGGTAGGG ATCTGCGGGC TCATACTGGA TGAGACCTAC
AAGACGATAG TAATAGGAGT ACCCGGAGGG CCCAAGAAGA GAATCTTTAA GGCTCAAGTA
GTGCTCAGGA TCAAGCTACC CGACGGCAAA GAACTACTCG TCGATGGAGC CTTCCTCGTT
GGTAGACCCG AGGAGAGGCT TAAGAGACGT GTCATGCTGT GGTAG
 
Protein sequence
MKITPKNILR HELIGLEACV VKSKNPSQVG ICGLILDETY KTIVIGVPGG PKKRIFKAQV 
VLRIKLPDGK ELLVDGAFLV GRPEERLKRR VMLW