Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0484 |
Symbol | |
ID | 4601782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 440085 |
End bp | 440420 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639773253 |
Product | ribosomal protein S17 |
Protein accession | YP_919896 |
Protein GI | 119719401 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0186] Ribosomal protein S17 |
TIGRFAM ID | [TIGR03630] archaeal ribosomal protein S17P |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.16507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGT TGAAGGGTGT GGGTATTCCC GGAGTAAGCC CTCCGCAAAT GAAGTGTAAC GACCCTCTGT GCCCGTGGCA TGGGGAGTTG CCCGTGAGAG GACAAGTGCT GAGGCTACGC GTAGAGAAGG TTAAAATGCA CAACGTGGCG GTGGCTGTAC ACGAGTATCT TTACTACAAC GAGAAGTATA AAAGGTATGA AGTAAGGCGT AAAAAGAAGC ATGTACGTGT GCCGCCCTGC ATACCGGTGA AGCCCGGCGA CGAGGTCATC GTCGCGGAGA CACGCCCGTT GGCAAAGTCT GTCTCGTTCG TAGTTATAGG AAAGGTTGGC GGGTGA
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Protein sequence | MAKLKGVGIP GVSPPQMKCN DPLCPWHGEL PVRGQVLRLR VEKVKMHNVA VAVHEYLYYN EKYKRYEVRR KKKHVRVPPC IPVKPGDEVI VAETRPLAKS VSFVVIGKVG G
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