Gene Tpen_0484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0484 
Symbol 
ID4601782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp440085 
End bp440420 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content53% 
IMG OID639773253 
Productribosomal protein S17 
Protein accessionYP_919896 
Protein GI119719401 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0186] Ribosomal protein S17 
TIGRFAM ID[TIGR03630] archaeal ribosomal protein S17P 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.16507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGT TGAAGGGTGT GGGTATTCCC GGAGTAAGCC CTCCGCAAAT GAAGTGTAAC 
GACCCTCTGT GCCCGTGGCA TGGGGAGTTG CCCGTGAGAG GACAAGTGCT GAGGCTACGC
GTAGAGAAGG TTAAAATGCA CAACGTGGCG GTGGCTGTAC ACGAGTATCT TTACTACAAC
GAGAAGTATA AAAGGTATGA AGTAAGGCGT AAAAAGAAGC ATGTACGTGT GCCGCCCTGC
ATACCGGTGA AGCCCGGCGA CGAGGTCATC GTCGCGGAGA CACGCCCGTT GGCAAAGTCT
GTCTCGTTCG TAGTTATAGG AAAGGTTGGC GGGTGA
 
Protein sequence
MAKLKGVGIP GVSPPQMKCN DPLCPWHGEL PVRGQVLRLR VEKVKMHNVA VAVHEYLYYN 
EKYKRYEVRR KKKHVRVPPC IPVKPGDEVI VAETRPLAKS VSFVVIGKVG G