Gene Tpen_0470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0470 
Symbol 
ID4602029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp428919 
End bp429410 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content57% 
IMG OID639773238 
Product30S ribosomal protein S19e 
Protein accessionYP_919882 
Protein GI119719387 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2238] Ribosomal protein S19E (S16A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAACG CGAAGTTCGT GCCTCCGAGA CTACTGATAG AAGAGCTGGC CGCGTATCTC 
AAGGAAAACG TGAAAGAGAT ACAGCCACCC GAGTGGGCTC TGTACGCGAA GACAGGTCCT
ACCAGGGAGC GACCCCCGCA AGACCCAGAC TGGTGGTACA AGAGGTGCGC CGCCCTTCTC
AGGAAAATAT ACCTGGAGGG TCCTGTTGGG CTTGAACGGC TCCGCACGGC GTACGGCGGT
AGAACAAAGA ACACCGTGAA GCGTAAACAC TTCAAGAAAG CCGGAGGCTC CGCCATAAGG
AAAGCTCTCC AACAACTTGA AAGCGCCGGG CTCGTCGCGA AGACCCCGAG AGGGCGCGTA
ATCACCGAGA AGGGGAGGGC GCTCGTAGAC ACTACGGCGT TACGCATATT CAAAAAGCTG
GTAGAAGAGA GACCAGAGCT CTCCAAGTAC CTCGCGAAGC CTGCAAGTAC ACCCGTAAGC
ACGGAGTCGT AG
 
Protein sequence
MVNAKFVPPR LLIEELAAYL KENVKEIQPP EWALYAKTGP TRERPPQDPD WWYKRCAALL 
RKIYLEGPVG LERLRTAYGG RTKNTVKRKH FKKAGGSAIR KALQQLESAG LVAKTPRGRV
ITEKGRALVD TTALRIFKKL VEERPELSKY LAKPASTPVS TES