| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0454 |
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| Symbol | |
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| ID | 4601857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 413357 |
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| End bp | 414406 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639773221 |
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| Product | hypothetical protein |
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| Protein accession | YP_919866 |
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| Protein GI | 119719371 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1499] NMD protein affecting ribosome stability and mRNA decay |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGATTC TCTGTCCTGT CTGCGGTAAG CCTACTGATA GGCTGATAGA TGGTTTATGC
CCGGAGTGTT ACCGCAGGAG TAGGCGTATA ATGGAGCCTA AGAGAGACGC GCTCAGGGTT
AAGGTTTGCA GGAAGTGCGG GAGGCTTTAC TACAAGGACG AGTGGCTAAG CTCCAGCGAG
GAGCTTGCCA TGTCTGTTGA AAAGGATCTG CCAAGGCTAG TAAAGGTGAG GGGAGAGCTT
AGAAGCGCGA GGGTTAGTCT CTACATCGAT AAAGGGTTCG CGGAGGTTCA CGCGGTCGGC
AGGGCTGATA GCGGCATTGA CTTCTTCTAC GAAGAAACTC TGAGGATACC GCTTAAGACC
GAGTACTCTA TCTGCGACTG GTGTCTAGGC AAGGTTTCGA AGAAGAAGAG CGCCATAGTA
CAGGTTCGGG CGAGCGAGAG AGAGCTCAGC AACGACGAGA AGAAAGCCGT GTACAAGGTT
CTAGACGAGC TTTCCTCTAG CGGCAACGCG GAGGCCTTAC CGTGGGACGT AAAGGAAGAA
GCCGGCGGAC TTGACCTGTA CTTCTCCTCC CCGAGGGCCG CGAGGGAGGT TGTACGAAGG
CTTTCAGAAA GAGTTTACTT CGAAGTACTC GAGACTAGTA AAAAAGTGGG GGTGGACGGT
AGCGGCCACG AGAAGTATCA GTCAACGATA AGGCTGTTGT TGCCCCACAT AGCTAGGGGC
GACGTTGTGC TCTACAGAAA CGAGTACTTC CTCGTTAAAG ACGTCGACCC TAAGAGAGTC
ACGCTCTTAA ACCTAAGTAG CTACGAGAAA GAGGTGTACA TGCTCAACAA AAGCTTACTT
TCGCGGATAT CCGTGATTGC ACGGGCTAAC GAGTTGAAGA TGGGTGTAGT TGTCTACACC
GCTGGAGACA AAGTTCACGT AATGAGCAAC GACTACAAAG TATACGAGGT GGACATACCT
CCAAGCGCTA GGAAGCTTTT TCAGGAGGAA CAAACAGTCG GGCTACTCGT ACTCGAAAAC
AAGGTACTGC TTATACCGAG CCCGCCTTAG
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| Protein sequence | MKILCPVCGK PTDRLIDGLC PECYRRSRRI MEPKRDALRV KVCRKCGRLY YKDEWLSSSE
ELAMSVEKDL PRLVKVRGEL RSARVSLYID KGFAEVHAVG RADSGIDFFY EETLRIPLKT
EYSICDWCLG KVSKKKSAIV QVRASERELS NDEKKAVYKV LDELSSSGNA EALPWDVKEE
AGGLDLYFSS PRAAREVVRR LSERVYFEVL ETSKKVGVDG SGHEKYQSTI RLLLPHIARG
DVVLYRNEYF LVKDVDPKRV TLLNLSSYEK EVYMLNKSLL SRISVIARAN ELKMGVVVYT
AGDKVHVMSN DYKVYEVDIP PSARKLFQEE QTVGLLVLEN KVLLIPSPP
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