Gene Tpen_0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0447 
Symbol 
ID4601870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp406433 
End bp406948 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content49% 
IMG OID639773214 
Productheat shock protein Hsp20 
Protein accessionYP_919859 
Protein GI119719364 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTTACG AATTTGACGA GTGGTTCAAG AGGATAAGGA AGATGATGGA GGAATTCGAC 
AAAATGTTCG AGGAGATGAT GCGCGAACCT ATGCTCTACT CTGGAGAAAA AGGCAGAAGA
ATAATTGGAC CGTACTACTA CGGGTTTAGC GTCGAGATAG GTCCCGACGG TGTTCCCAAA
GTCAGGGAGT GGGGCAATAT CCGCCCTGGA CCCATAAAGC CTGTCGTCAA GGAATCCATT
GAGCCCTTCA CGGATGTTTT CGACGAAGGT GACCATTACA GAGTGATACT CGATATTCCC
GGAGTCGAGA AGGATGAAAT AAACGTAGAG GCTACTGAAA ACTCCCTCGT GGTATCCACG
ACTGGCGAGA GGAAGTACTA CAAGGAGGTC AGGTTTAGCG ACCCCGTAGA CCCCTCTACC
GCGAAAGCTC AGTACAAGAA CGGAGTTCTA ACGGTGACTA TCGAGAAGAA GGAGAAGCCT
AAGAAGGAGA GAGGCGTCAA GATAAAGGTA GAGTAG
 
Protein sequence
MSYEFDEWFK RIRKMMEEFD KMFEEMMREP MLYSGEKGRR IIGPYYYGFS VEIGPDGVPK 
VREWGNIRPG PIKPVVKESI EPFTDVFDEG DHYRVILDIP GVEKDEINVE ATENSLVVST
TGERKYYKEV RFSDPVDPST AKAQYKNGVL TVTIEKKEKP KKERGVKIKV E