Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0447 |
Symbol | |
ID | 4601870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 406433 |
End bp | 406948 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639773214 |
Product | heat shock protein Hsp20 |
Protein accession | YP_919859 |
Protein GI | 119719364 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTTACG AATTTGACGA GTGGTTCAAG AGGATAAGGA AGATGATGGA GGAATTCGAC AAAATGTTCG AGGAGATGAT GCGCGAACCT ATGCTCTACT CTGGAGAAAA AGGCAGAAGA ATAATTGGAC CGTACTACTA CGGGTTTAGC GTCGAGATAG GTCCCGACGG TGTTCCCAAA GTCAGGGAGT GGGGCAATAT CCGCCCTGGA CCCATAAAGC CTGTCGTCAA GGAATCCATT GAGCCCTTCA CGGATGTTTT CGACGAAGGT GACCATTACA GAGTGATACT CGATATTCCC GGAGTCGAGA AGGATGAAAT AAACGTAGAG GCTACTGAAA ACTCCCTCGT GGTATCCACG ACTGGCGAGA GGAAGTACTA CAAGGAGGTC AGGTTTAGCG ACCCCGTAGA CCCCTCTACC GCGAAAGCTC AGTACAAGAA CGGAGTTCTA ACGGTGACTA TCGAGAAGAA GGAGAAGCCT AAGAAGGAGA GAGGCGTCAA GATAAAGGTA GAGTAG
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Protein sequence | MSYEFDEWFK RIRKMMEEFD KMFEEMMREP MLYSGEKGRR IIGPYYYGFS VEIGPDGVPK VREWGNIRPG PIKPVVKESI EPFTDVFDEG DHYRVILDIP GVEKDEINVE ATENSLVVST TGERKYYKEV RFSDPVDPST AKAQYKNGVL TVTIEKKEKP KKERGVKIKV E
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