| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0427 |
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| Symbol | |
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| ID | 4602106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 387754 |
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| End bp | 389349 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639773192 |
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| Product | DNA ligase I, ATP-dependent Dnl1 |
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| Protein accession | YP_919839 |
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| Protein GI | 119719344 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGCTCT TCCGAGAGCT CGTCGAAGCC GCCGAAGCCG CTGGGAGGGT TTCCGGCAGA
AAGGAGAAAG TACGCATTCT CTCAGAGTTC CTTGGGAGGC TTTCCCCGGA GGAGGCTTCC
ATTGCGGCTA GGTTCCTCGC GGGGCACGTC TTCCCTGAAT ACGATAACCG AGAACTGGGC
GTCGGCTACT CACTTGTAAG AGAAGCGCTA AAGGTTCTCG ATCAAAAGCC TCTTTTTCTC
GTAGAACCTC AACCACCCGC GATCACCGAG GTTTACCGGC TACTCGAGCG GATTGCCGGC
GTGAGCGGTG AGGGTAGCAG GGAAAAGAAG CTGAAGCTTC TTGAGGGGCT ATTCTCGAGG
TTAAGCAGGA AAGAGGTTGA GTACTTGCTT CGCATACTGT TCGGGGAGGT TAGGATAGGT
GCCAGCACAG GGCTACTCCT AGAAGCCATA TCTAGGCTAT CGGGTGTGCC GTACGGAGAC
GTGCTTCACG CATACATGGT GCTGAGCGAC GTGGGGGACG TCGCCTTCAA AGCACTGGAA
TCGCCTGCCG CGCTTGGAAA GGTGGACGTA TCGCTGTTCC ACCCTGTCAA GCCGATGCTT
GCAGACATGG CTTACAATGT CGACGAGCTC TTCCAGGAGC ATGGTAGCCC TCTCCACCTC
GAGTACAAGT ATGACGGGCT ACGCGTACAG ATTCACATGG GGAGGGGGAA GGTCAGAGTC
TTTTCGAGGC GGCTCAGCGA CATAACTGAG TACGTCCCAG ACGTCGTGGA GCGCGCGGTG
GAGGGGCTAC ACGTAGAGGA GGCGGTTGTT GACGGAGAAG CTGTAGCCGT AATTGGCGGT
GCCCCAGTCC CTTTCCAGGA GTTGTTGCGA AGGGTTAGGC GGAAGAACGA GAGGGAAGAC
TTCCTCAAAA GCCTCCCCTT CGAGCTCCAC CTCTTCGACG TGATATACCT TAACGGAAAG
TCGCTAGTCA GAGAGCCTTA CTCTACTAGG AGCCGGCTAC TCCGCGAGAT CGTCGTGTCA
GAGGAAATCC TGGCGAAGAA GACCGTGGCG TATACACGCC AGGAAGCCTT GGAGTTCTAC
GAGTCCGCTG TAAGGAGCGG TAACGAGGGG GTGATGTCTA AGCGGCACTC CTCGGTGTAT
AAACCCGGGA TACGTGGGAG CGACTGGCTG AAGTTGAAGT CCTTCGACAC CATCGACTGC
GTCATTATAG CCGCGGAGTG GGGGCACGGC AGGAGGAGCG GGTGGCTAAG CGACTACCAC
CTTGGAGTGT ACGACGAGGA GAGCGGGAGG TTCCTCTCTG TAGGCAAAAC GTTCAAAGGG
CTGAGTGATG CGGAGTTCGA AGAGATGACG AAGCGGCTCT TACAGCTGAA GGTTAGGGAG
GAGGGTTACG TCGTCTACGT GAAGCCCGAG ATAGTGGTGG AGGTGGATTA CAGCGAGATT
CAGAGGAGTA AGCGGTACCC CTCGGGGTTC GCATTGAGAT TCGCGCGCAT TAGGCGTATA
CGCTTCGATA AGAGCCCCTA CGAGGTTACA ACCTTAAGGG AGCTCAGGGA AAGGTACTTG
CGCTCCATAC GCGCGAAGCG GTGGTCTCCG CAGTGA
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| Protein sequence | MALFRELVEA AEAAGRVSGR KEKVRILSEF LGRLSPEEAS IAARFLAGHV FPEYDNRELG
VGYSLVREAL KVLDQKPLFL VEPQPPAITE VYRLLERIAG VSGEGSREKK LKLLEGLFSR
LSRKEVEYLL RILFGEVRIG ASTGLLLEAI SRLSGVPYGD VLHAYMVLSD VGDVAFKALE
SPAALGKVDV SLFHPVKPML ADMAYNVDEL FQEHGSPLHL EYKYDGLRVQ IHMGRGKVRV
FSRRLSDITE YVPDVVERAV EGLHVEEAVV DGEAVAVIGG APVPFQELLR RVRRKNERED
FLKSLPFELH LFDVIYLNGK SLVREPYSTR SRLLREIVVS EEILAKKTVA YTRQEALEFY
ESAVRSGNEG VMSKRHSSVY KPGIRGSDWL KLKSFDTIDC VIIAAEWGHG RRSGWLSDYH
LGVYDEESGR FLSVGKTFKG LSDAEFEEMT KRLLQLKVRE EGYVVYVKPE IVVEVDYSEI
QRSKRYPSGF ALRFARIRRI RFDKSPYEVT TLRELRERYL RSIRAKRWSP Q
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