| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0418 |
|---|
| Symbol | |
|---|
| ID | 4600496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 380439 |
|---|
| End bp | 381863 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639773183 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_919830 |
|---|
| Protein GI | 119719335 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTGTG AAGAGAGGCT TGAAGAAGAG GTTAGGGAGG AGACGTGGAG GAGGGCGGCG
CTAAGCCTCT ACTCGACCGA GGTCGAGGAT AGGAGGAGGT CTAGGGGCGG GAAGAAGGGC
AGGGTACACT ATCGCGGCCT CTACGACGCA GTGTCTAGGA TTAACTGGGA CTTTACGCGC
TTCGCGGCGC ACGCGCTGAG CGTCGTGCCG GACGAGGCAT ACTCCAGGTT CGGCAGGCTG
TTTGACATCG ACGCGAGGAA GTACCTCCTG CTGAACGACG ACGAGAAGCC GAGGGAGGGA
GGCGCAGTTG TGGAGCTACG CGATAGGCTA CAGGCAATCG TCGACGCTAC CGAAGACGGC
CTCAAAGTTG AGAGACACGG AAAGCACTGG CAAGTATACA TACCTGGAGA AAACTGGCAC
GTCATCGCTT ACAAGCCTAC ACATAACTGG ATCATACTCA TCCCGTTGAA AGGCTTCTGG
GTTGAGTCAG AGTTTCCCAG GGTTCTAGTG AATACTCCGA TCAGCGTTTT GCAGAGCCTG
CAGAAAGGGT GGGTCTTAAC GGATGTGACA CCCCCTCATG GGCGCTACAG CTACGTACAA
TTCAGCACCA CTCAACCGTG GCAGTTGCCA GCCACGCTCG CGGCCTTTCC TAGTGACAAT
ATCTGCTTGG GCGTTACGGC GGGCGCACTC GGCAGTACCA AGCTAAGCAT CGAGTGGAAG
GTGCACGTCT ATAGCTACGA GGAGGAGCTG GGCTGGGCCT CCGAACTCAT CGGCGAGGTT
AAACGTGCAG AGTTCCGCCA GCTTATCGAT GCTTGCAGGG TGCTACAGGG AGACCCGGTC
GCTCTACACA CAGCCTTCCT GGGGGACGGC TACCTCGCCT TCTTCCTGAG GCTTCGGATG
CTCTTCTTCA GTATTGGACA CGAGATTTTC TACCTCCCAG CTGAGAGCGC TATAGTCAAC
GCTAGACTCG CCGTCGAGCT AGCACCAGAG TACACAAAGT TCGTCTCATT AGTGACGAAG
TGTCCAAAGA TTAAACACTT CTTGTTCGTC GGCTTCGGAT TGCCGCAAAA GAGAGGTATG
AGAGACGGTC AGAGAAAGAC CCCGTTCTAC GCCGAGATAG CGGGGGCTAG GCTACACCTA
GTCTACATTT CTACGAGGAA TCATGTCTAC GCGAGGATCG CGGTCGACGA TGCGCCTCAA
GGCTGGGTGG AGGAGGCGCG CGCTCAGGGC TGGGACGTCC GGGTGGTTAA CATGGGAAGC
GAGGAGTACT ACCAGGTTAC ACATGTCTCT TTGATGGAGC ACGCGCGCTA CGACGAAGCA
CTGCGGGAAA CACTCCTCGC CTTCGCGAAG GCGAAAGCCG AGCAGTACCC CAAAGCCTGG
GAACTCGTAG AGCGCCTCGA AAAGCTGGGG ACAGGGCAGG AATAG
|
|---|
| Protein sequence | MGCEERLEEE VREETWRRAA LSLYSTEVED RRRSRGGKKG RVHYRGLYDA VSRINWDFTR
FAAHALSVVP DEAYSRFGRL FDIDARKYLL LNDDEKPREG GAVVELRDRL QAIVDATEDG
LKVERHGKHW QVYIPGENWH VIAYKPTHNW IILIPLKGFW VESEFPRVLV NTPISVLQSL
QKGWVLTDVT PPHGRYSYVQ FSTTQPWQLP ATLAAFPSDN ICLGVTAGAL GSTKLSIEWK
VHVYSYEEEL GWASELIGEV KRAEFRQLID ACRVLQGDPV ALHTAFLGDG YLAFFLRLRM
LFFSIGHEIF YLPAESAIVN ARLAVELAPE YTKFVSLVTK CPKIKHFLFV GFGLPQKRGM
RDGQRKTPFY AEIAGARLHL VYISTRNHVY ARIAVDDAPQ GWVEEARAQG WDVRVVNMGS
EEYYQVTHVS LMEHARYDEA LRETLLAFAK AKAEQYPKAW ELVERLEKLG TGQE
|
|---|
| |