Gene Tpen_0385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0385 
Symbol 
ID4602153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp348948 
End bp349907 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content52% 
IMG OID639773146 
Productinitiation factor 2B related 
Protein accessionYP_919797 
Protein GI119719302 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1184] Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.14036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAAG AAGAGCTGGA GAAGATAAGT TCTGGGAAGA TTTACAGCTC GACGGAGACT 
GTCATCTACG CCTTAGACCT CCTAAACACT GTTGTGAAGC AAAAGGATCC CAGCTTGTTC
ATCGAGGTTA CTGAGAAAAT TCTGCGCTCG CGTGTCACCT CGGCGATGCT TCAAAACATT
ATGCGAATAA TCCTGGGGGA ACTAGTAGCC GCCCAGCCGA GATCCTTTGT AGAACTGGGC
GAAGCCTTCC AGAAGCAATA CGAGCGGGCC ACCTCCAGGC TTAGGGAAGA CGTTGAAAGG
TCTGCCTCGA TAGCTTCGAG GAGGATATCC AATGGCGACG TTCTGCTAAC AAACTCCTAC
AGCTTGTTCG TTAAGAAAAC AATAGAGAAA GCTCTCCGCG ACGGTAAGGA GCTTAAAGTC
TACGTTACCG AGTCTAGGCC TACAGGCGAA GGGGTTCGAT TCGCGGCAGA ACTAGCCGAT
ATGGGTGTCG ACACGTACCT CATAGTCGAC TCTGCGGCGA GGTTCTTTAT GAAAGAAGTG
GACAAAGTGC TGTTCTCCTC GGAGGCGATC TCGGCTAATG GCGCGGTGGT GAACAAGGTC
GGCACAAGCC TTATCGCTCT GGCAGCACAC GAAGCGAGGG TACGCGTCTA CGTGGTAAGC
TCGACCCTAA AGTTTAGCCC CGAGACCATA ATTGGAGAGC TTGTCGAAAT CCCCGAGATA
GAGTTCACGG AGTACATACC GAGTGGATGG GAAAACCTCA GGAAGTTAAA GCCCAGATCC
CCCCTCTTCG ATGTAACGCC GCCGTCGTAC ATAGACGCGA TAATAACGGA GAAAGGAGTA
ATAGCGCCGG AATTCTCCAT AGTGATGCTT AGAGAGTCCT TCGGCTGGCC ACTGAAGGTG
GAGAAAGTCG AGAACCTGCT GAGCAGACTG AAGAACATGC TGGTAGGGGA AGGGCGATGA
 
Protein sequence
MFEEELEKIS SGKIYSSTET VIYALDLLNT VVKQKDPSLF IEVTEKILRS RVTSAMLQNI 
MRIILGELVA AQPRSFVELG EAFQKQYERA TSRLREDVER SASIASRRIS NGDVLLTNSY
SLFVKKTIEK ALRDGKELKV YVTESRPTGE GVRFAAELAD MGVDTYLIVD SAARFFMKEV
DKVLFSSEAI SANGAVVNKV GTSLIALAAH EARVRVYVVS STLKFSPETI IGELVEIPEI
EFTEYIPSGW ENLRKLKPRS PLFDVTPPSY IDAIITEKGV IAPEFSIVML RESFGWPLKV
EKVENLLSRL KNMLVGEGR