| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0380 |
|---|
| Symbol | |
|---|
| ID | 4602148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 345390 |
|---|
| End bp | 345815 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639773141 |
|---|
| Product | translation initiation factor IF5 |
|---|
| Protein accession | YP_919792 |
|---|
| Protein GI | 119719297 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1601] Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain |
|---|
| TIGRFAM ID | [TIGR00311] translation initiation factor aIF-2, beta subunit, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00129968 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGG CGTTTATGAG CTACGAAGAG CTACTTGAAA GAGCCTATTC GATGCTCCCA
AGGCGTAGAC GTCGCAGCAC GGGTGAAAGG TTCGTTTTAC CAACCTTCGA GGTGAGCAAG
ACGGGGAAGA AGGTATACAT ACACAACTTT AAAGACGTGG CAGAGAAGCT TAACAGGGAA
CCCCCCGTTC TTCTACGCTT TATACTAAAG GAGATAGCTC TTCCAGGTGT GTACGAGAAC
GGTACCGCCG TGATACACGG TGAAGTGTCT GCGCAGACCC TCAACAAGCT ACTTGAAAGA
TTCTACAACG AATACGTCAA GTGCCCGGTA TGCGAAGCAC CGGACACGAT CCTCGTAAAA
GAGAAGAAAC TAATGTACAT CAAGTGTACA GCATGCGGAG CCGTCTCGCC AGTCAAACCC
TTCTAG
|
|---|
| Protein sequence | MTQAFMSYEE LLERAYSMLP RRRRRSTGER FVLPTFEVSK TGKKVYIHNF KDVAEKLNRE
PPVLLRFILK EIALPGVYEN GTAVIHGEVS AQTLNKLLER FYNEYVKCPV CEAPDTILVK
EKKLMYIKCT ACGAVSPVKP F
|
|---|
| |