| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0379 |
|---|
| Symbol | |
|---|
| ID | 4602147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 344228 |
|---|
| End bp | 345382 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639773140 |
|---|
| Product | tRNA (guanine-N(2)-)-methyltransferase |
|---|
| Protein accession | YP_919791 |
|---|
| Protein GI | 119719296 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1867] N2,N2-dimethylguanosine tRNA methyltransferase |
|---|
| TIGRFAM ID | [TIGR00308] tRNA(guanine-26,N2-N2) methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0479269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGATC TCTCCACGGT ATCAGAGGGT AGGGGAGTCT TCAAGGTATA CCCCCCTGAA
AAGTACAGGG ACCCTGCTTG GGCCCCGGTT TTCTACAACC CTAGGATGCG GTGCTCGAGG
GATATCTCGT CTGTCATCGT GGGTGCGTAC GCAGAACTAC TCGGTAGAGG GGGGCTAGTG
GTGGTAGACG CTTTCAGCGC AACGGGTATT AGAGGGATAA GGTACGCGTT AGAGAACGAG
GGCGTAGGCA GGGTCATTTT GAACGACATA AATCCGAGAG CGGTGGAAAT CATTAGGCAA
AATGTAGATT TAAACGGGGT TTCAGACATC GTGGAGGTAC GGAGAGAGGA TGCTTCTAGC
TTGCTTGCAT CGCTAAGCGG CGTGGACATC GTGGACTTGG ATCCTTTCGG TAGCCCGGCG
GAGTACGTAG ACCCGGCGTT AAGGTGCCTG AAGCATAAGG GCCTGCTTTG CGTCACCGCG
ACGGACCTCC CGCCGCTCTT AGGCAAGTAC CCGAAAACCT GCGTAAGGAA GTACTTCTCC
AAGAGCATAG AGACGGAGTT TTCAAGGGAA CTCGCCGTAA GGATACTGCT CTACTTCATT
GCACGCGAAG CGGCAAAACT GGGTAGAACA ATCGTCCCGC TCTACTCGTA CTACATGGAA
CACCACGTAA GGGTCTGCGT ACTAGTACTG AAGACAGAGA GCCGCTACGG AGGATTAACG
GACTCTATAG GGTTTGTGAA GTACAACCCG ACATCCCTTG AAAGAGCGGC TGTCCCTCTT
TTCGACTTCT ACCGGGAAGA GAGGAGCGAC AACTGGGTTG TGGGTGGACC TTTATGGGTA
AAGGAGATCT TCCAAAGAAC GTTTGCCGAT GCGGTAGGTA GAGCGTATAG TAGCAAGTTG
AAGGCACACG GTCTATGCGG GAAGGGTTGG AGGGTAGTTT CTACGATTCT AGAGGAAGTT
TCCCGTCCCC CCTTCTACTT CACCACGGAG AAGTTTGCGA GCACGTACCG ATTAAAAGAG
GAGAAGTCTG TTGTCGAGGT GTTGGAGGTG TTAAGGGCTC GAGGATTTGA GGGGTCCCGT
ACGCACTTTG ACCCGAAAGG CTTTAGGACG AGCGCATCCA TAGGAGAAAT TCTCGAAGCA
ATAGCGAAGA GTTGA
|
|---|
| Protein sequence | MEDLSTVSEG RGVFKVYPPE KYRDPAWAPV FYNPRMRCSR DISSVIVGAY AELLGRGGLV
VVDAFSATGI RGIRYALENE GVGRVILNDI NPRAVEIIRQ NVDLNGVSDI VEVRREDASS
LLASLSGVDI VDLDPFGSPA EYVDPALRCL KHKGLLCVTA TDLPPLLGKY PKTCVRKYFS
KSIETEFSRE LAVRILLYFI AREAAKLGRT IVPLYSYYME HHVRVCVLVL KTESRYGGLT
DSIGFVKYNP TSLERAAVPL FDFYREERSD NWVVGGPLWV KEIFQRTFAD AVGRAYSSKL
KAHGLCGKGW RVVSTILEEV SRPPFYFTTE KFASTYRLKE EKSVVEVLEV LRARGFEGSR
THFDPKGFRT SASIGEILEA IAKS
|
|---|
| |