| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0368 |
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| Symbol | |
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| ID | 4600768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 334772 |
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| End bp | 336175 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639773129 |
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| Product | tRNA CCA-pyrophosphorylase |
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| Protein accession | YP_919780 |
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| Protein GI | 119719285 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1746] tRNA nucleotidyltransferase (CCA-adding enzyme) |
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| TIGRFAM ID | [TIGR03671] CCA-adding enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.243596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTGCC GTGATCCATG CGTCTTTAAG TACCCGGAGT GCCTTGAAGA AGTCCTGAAG
AAAGTAAAGC CCAGCGCAGA GGATAAGAGA GCTCTCGACC TTTTCGCGGA GAGACTAATG
GCGGTGGTGC TCGAGGAGGC GAATACGCGT GCAGGAGGAG AAGTGAGCGT AGAGCTTCAC
GGCTCCTACA GGCACGATAC TTGGTTGAAA GGCGAGGCAG ACATAGACTT GTTCCTCTTA
TTCCCGAAGA AGTATTCGCT GGAAGAGATG AAGGAGGTGG CCAGAAGAGT TTCTGAAGGT
TCTTCTGCAA GGCTGGGCGC TCGAGTAGAG GAAAGGTATG CCTCCCATCC GTACTACACG
CTAGTGTTCC CGAACAGCGT CGAAGTAGAT GTAGTGCCTG CATACAGGGT TTTTTCTCCA
AGCGAGATAG TCACGCCTGT CGACAGGACG CAACTTCACA CTGCGTACCT CGAGAGAAAG
CTGTCGGAGA AACCCTGGCT CAAGGACGAG ATACGCCTCT TGAAAAGGTT ACTAAAAAAC
CTGGGAATCT ACGGCGCTGA GCAGAGCTTA AAGGGGTTCT CAGGATACCT AGCGGAGATA
CTCGTCGTGT ACTACGACGG GCTCGAGAAG CTCCTACGCG AAGCGGCGCG GTGGCGTCCC
GGCAAAGTCG CGGTGCCCGA CGGGAAGGAT CTTCTGGAAA GGTTCAAGGG ACAGCCGCTC
GTGGTTCTTG ACCCCGTGGA TTCCAGGAGA AACGCGGCGG CGTCTGTGAG CCTTGACTCG
TTGTCGAAGT TTATCCTTGC CGCCAAGATG TTCAGTGAAG ACGAGAACAT CCTGTGTTGC
CTGTTAGACC CTCCGGAGCC CCGAGTGGAT CCAGACGAGG AACTGCCCCG CTTACTGAGT
TCGCACAACG TTATTGCCGT GCTGGCACGT CGTCACCCCG AATTACCTGG CGATGCCTTG
CTCGGCAAGA TGCAGAGAAT AGGCAAAAGC CTCGAGGGCT ACCTCGCAGG GCTAGGCTTT
AAGGTTCTAA GGTTCAAGGC CACGTTGCTA TCTGGTACAC CGGCGTTGCT AGTAGAGCTG
GAATCGCTTA CTTCGCCGAA GACGGTTCTA CACGTAGGAC CACCTGTTTG GCACCCCAAC
GCGGGGAACT TTCTCAGGAA GTGGTCTACG AAGAGCTACG GTCCCTTCGT TTCAAACGGT
AGGCTCGCCG TGATTAGAAA CGTGGTTTCA GAGGAAATCT CGGAGCACGT ATTATCGCTT
TTGAAGAGCT ACGCGGGTTT TTCCTGGGAG GTTAAGGATT TGAGGAACAT ACTCCGCGAT
TTATCAGCAG AGGAGAAGAA GGAGGTCTAC AGATGGTTGA GCAGTGTAGA ACCCTGGACA
ATCTGCGCGC AATACATGAG TTAA
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| Protein sequence | MTCRDPCVFK YPECLEEVLK KVKPSAEDKR ALDLFAERLM AVVLEEANTR AGGEVSVELH
GSYRHDTWLK GEADIDLFLL FPKKYSLEEM KEVARRVSEG SSARLGARVE ERYASHPYYT
LVFPNSVEVD VVPAYRVFSP SEIVTPVDRT QLHTAYLERK LSEKPWLKDE IRLLKRLLKN
LGIYGAEQSL KGFSGYLAEI LVVYYDGLEK LLREAARWRP GKVAVPDGKD LLERFKGQPL
VVLDPVDSRR NAAASVSLDS LSKFILAAKM FSEDENILCC LLDPPEPRVD PDEELPRLLS
SHNVIAVLAR RHPELPGDAL LGKMQRIGKS LEGYLAGLGF KVLRFKATLL SGTPALLVEL
ESLTSPKTVL HVGPPVWHPN AGNFLRKWST KSYGPFVSNG RLAVIRNVVS EEISEHVLSL
LKSYAGFSWE VKDLRNILRD LSAEEKKEVY RWLSSVEPWT ICAQYMS
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