Gene Tpen_0353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0353 
Symbol 
ID4600891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand+ 
Start bp322984 
End bp323613 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content49% 
IMG OID639773114 
Productputative nucleotide binding protein 
Protein accessionYP_919765 
Protein GI119719270 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1491] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.838968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCCGAG GAGATTATCA AAGAAAGCCC TACAGACCTC TGGACGAGAA CCTAGTCGTA 
CTCGATATGC TTCCATACGG CGACGCAGTT AGAGGTATAA AGTACCCTCT TGTTCAGACT 
ATAGGAGAGT ATAGGTTTCT ACTCGTAGAG CTGAAGTCTA CAACCCCCCA GGCACCGTCC 
CTCAAGCCCC TTGACAGGAT TTCATCGGAG TACCTGCGCG AAGCTAGGTT GCTTTCCTTC 
GCCAGGTATC TGACGTACGA CGAGCTTTCT GCGACTGCAA AGGCGAACCT GGTAGAAGCA 
GTGACGGCCA TAGTGAAGGT TCAGGAGAAA AGGTTCGTAG ACTTTTTTAA CAATGCTCAG 
CCGTTGTCGA AGAAGGCGCA CACGCTAGAG CTCCTCAAAG GTATAGGTAA AAGGACGCTG 
TGGAAGATAC TCGATGAGAG GCGGAGAAAG CCCTTCGAGT CCTTCGAGGA TATAAAGGCG 
AGAGCTGATA TAGACCCTGT CGAGCTGATA GTAGAAAGGA TACTCGAAGA GCTTAAAGAG 
CCTCAAACAA TTTATATCTT CGTAAACCCG CCTTACGGAC CCGTAGCTAG AAGTGGTAGA 
AGGGAGGGGT TCCGTGAGTA CAGGTACTAG
 
Protein sequence
MFRGDYQRKP YRPLDENLVV LDMLPYGDAV RGIKYPLVQT IGEYRFLLVE LKSTTPQAPS 
LKPLDRISSE YLREARLLSF ARYLTYDELS ATAKANLVEA VTAIVKVQEK RFVDFFNNAQ 
PLSKKAHTLE LLKGIGKRTL WKILDERRRK PFESFEDIKA RADIDPVELI VERILEELKE 
PQTIYIFVNP PYGPVARSGR REGFREYRY