| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0348 |
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| Symbol | |
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| ID | 4601459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 320952 |
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| End bp | 321212 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639773109 |
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| Product | transcription factor CBF/NF-Y histone |
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| Protein accession | YP_919760 |
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| Protein GI | 119719265 |
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| COG category | [B] Chromatin structure and dynamics |
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| COG ID | [COG2036] Histones H3 and H4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGAAA AAAGCCCGAG GACTAGGCAA CACGAGATCC CTTTAGCCCC TCTTAGAAGG
ATATTCCGCA GCCAGGGCGC TGAGCGTATA AGCGACGACG CGGTGGTTTT CCTTAGGGAG
TATTTAGAGA AGCTTGCAAG GGAAATAGCC TTAGAGGCGA TAGAGGCTTC TAGGCATGCA
AACAGGAGGA CAGTAACGGA CGAAGATGTG AAGTTTGCTA TCTCGAGGCT TCAGAGAGCG
CATTCTTCAC AGACTCTTTA A
|
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| Protein sequence | MSEKSPRTRQ HEIPLAPLRR IFRSQGAERI SDDAVVFLRE YLEKLAREIA LEAIEASRHA
NRRTVTDEDV KFAISRLQRA HSSQTL
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