Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0292 |
Symbol | |
ID | 4601301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 260514 |
End bp | 260903 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639773050 |
Product | putative phage repressor |
Protein accession | YP_919705 |
Protein GI | 119719210 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02228] signal peptidase I, archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000355656 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTGAGG ATCGGAGGGA AATTGTATTG TATGCTTTGA CTATAGTGGG GTTGCTGGTC TTCTTGTTAT CGCTTCGATT CGTGCTCTCA ACCCCCGTCC CCCTAGCCGT TGTTTCGAGC TGGTCCATGG AGCCCGTGCT ACACGTTGGA GACGTCGTGG TAGTCGCCGG GGGGAACAGC TACACACTCG GCGACATCGT GATATACGAG AGAGGAGGAG AGCTCATAGT TCACCGAATA GTTTTATCGG TGAACGGCAA GTACGTAACT AAGGGAGACG CCAACCCCCA GGCTGACAAC ATCGTGCTAG GTAAAGACGC GATATACGGA AAGGTTCAGA TCGTAATACC GTACATCGGA GCATTAAAAC TAATATTCTA CAAAGGCTAG
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Protein sequence | MAEDRREIVL YALTIVGLLV FLLSLRFVLS TPVPLAVVSS WSMEPVLHVG DVVVVAGGNS YTLGDIVIYE RGGELIVHRI VLSVNGKYVT KGDANPQADN IVLGKDAIYG KVQIVIPYIG ALKLIFYKG
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