| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0291 |
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| Symbol | |
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| ID | 4601300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 258656 |
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| End bp | 260293 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639773049 |
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| Product | thermosome |
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| Protein accession | YP_919704 |
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| Protein GI | 119719209 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal
[TIGR02340] T-complex protein 1, alpha subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00322261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAGG CTCAGATCCC TGTATTAATA CTTAAAGAGG GTACTCAGAG AACCACCGGG
AGAGATGCCA GGAAATCCAA CATCTACGCC GCAAAGGTCA TAGCGGAGGC CATGGCGAGC
TCTCTAGGTC CTAGGGGCAT GGACAAGCTC CTAGTTGATT CTTTTGGAAA CGCGACGATC
ACCGGTGACG GCGCGACCAT ACTCAAGGAG ATGGAAGTAC AGCACCCGGC CGCTAAAATG
CTCGTTGAGG TCGCGAAGGC TCAGGATGAC GAGGTTGGAG ACGGTACAAC CACTGTAGTC
GTCCTAGCAG GGCAGCTGCT CGCTGCCTCC GAGGAGCTTC TCGACGAGGA CATTCACCCC
ACGACAATAG TGGAGGGTTT CGAAAAGGCG CTCGTTGAGG CTACCAGAAT AATTGACGAG
ATTTCCGAGA CCGTAGACCC ACTCGACAGG ACTGTCCTCG AGAACGTTGC GAAGACTGCC
CTTTCAAGCA AGGTTGTAGC GGACTACAAG GACTTCTTGG CTAAGCTCGT CGTAGACGCT
GCTCTGACGG TCGTTGAAAA GAAGGACGGA AAGTACAACC TAAGCCTGGA CGATATCAAG
GTGGAGAAGA AGAGAGGAGA GAGCATAACG GAAACAATGC TGGTAAAGGG CATAGTGCTC
GACAAGGAGG TTGTGCACCC GGGTATGCCT AAGAGGGTTA CGAACGCGAA GATAGCCCTC
CTAGACGCCC CGCTAGAGAT AGAGAAGCCT GAGTGGACTG CTAAGATAAA CGTTACAACC
CCGGAGCAGC TGAAGATGTT CCTAGACCAG GAGGCGGAGA TCCTGAGAAA GAAGGTCGAG
AAGATTAAGG AGAGTGGTGC TAATGTTGTT TTCTGTCAGA AGGGTATTGA TGATGTTGCT
CAGTACTACT TGGCTAAGGC TGGTATTCTT GCTGTTAGGC GTGTGAAGAA GAGTGATATG
GAGAAGCTTG CTAGGGCTAC TGGTGCTAGG ATTCTCACTA GGGTGGAGGA TATTACGCCT
GAGGCTCTCG GTAGGGCTGA GCTTGTGGAG GAGAGGAAGG TTGCAGACGA GAAGATGGTA
TTCGTCGAGG GATGCCCCAA CCCCAAGAGC GTAACAATAC TAGTAAGAGG AGGGGCTGAC
CACGTAGTCG ACGAGGCCGA GAGGGCCATA CACGACGCTC TAAGCGTCGT GAGGAACGTG
ATCAGAGAGC CTAAGATCGT TGCCGGTGGA GGAGCTGTCG AAATAGAGCT CGCTATGAGG
CTCCGAGACT TTGCCAGAAC TCTGCCCAGC AGGGAACAGC TAGCTGTGCA GAAGTACGCC
GAGGCGCTTG AAAGCATCGT AGGCATCCTT GCCCAGAACG CCGGAATGGA GCCTATCGAC
GTACTAGCAG AACTCAAGAC ACGCCATGCG AAAGGCGAGA AGTGGGCAGG TGTAAATGCC
TACACGGCGA AAGTAGAGGA CATGAAGAAG GCAGGCGTCT TGGAGCCCGC GCTCGTAAAG
AAACAGGTAC TTAAATCGGC GACAGAGGCC GCTGTAATGA TACTGAGGAT CGACGATATC
ATTGCTGCTC AGCCGCCGAA GTCCAAGGAG AAGAAAGGAG AAGAGGAGAA GGAGAAGGAA
AAGACGGAGT TTGACTAG
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| Protein sequence | MAQAQIPVLI LKEGTQRTTG RDARKSNIYA AKVIAEAMAS SLGPRGMDKL LVDSFGNATI
TGDGATILKE MEVQHPAAKM LVEVAKAQDD EVGDGTTTVV VLAGQLLAAS EELLDEDIHP
TTIVEGFEKA LVEATRIIDE ISETVDPLDR TVLENVAKTA LSSKVVADYK DFLAKLVVDA
ALTVVEKKDG KYNLSLDDIK VEKKRGESIT ETMLVKGIVL DKEVVHPGMP KRVTNAKIAL
LDAPLEIEKP EWTAKINVTT PEQLKMFLDQ EAEILRKKVE KIKESGANVV FCQKGIDDVA
QYYLAKAGIL AVRRVKKSDM EKLARATGAR ILTRVEDITP EALGRAELVE ERKVADEKMV
FVEGCPNPKS VTILVRGGAD HVVDEAERAI HDALSVVRNV IREPKIVAGG GAVEIELAMR
LRDFARTLPS REQLAVQKYA EALESIVGIL AQNAGMEPID VLAELKTRHA KGEKWAGVNA
YTAKVEDMKK AGVLEPALVK KQVLKSATEA AVMILRIDDI IAAQPPKSKE KKGEEEKEKE
KTEFD
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