| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0285 |
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| Symbol | |
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| ID | 4602095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 249254 |
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| End bp | 251920 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639773041 |
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| Product | DNA-directed RNA polymerase subunit A' |
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| Protein accession | YP_919698 |
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| Protein GI | 119719203 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACGA GCACGAATCC CAAGATAGTC GCCGGGATAA AGTTTGGGAT ACTCTCTCCA
GAGATGATCA GGAAAATCGC CGTGCTAAGG ATAGAGACCA GTGAGCTCTA CGACGAGGAA
GGCTTCCCGA TACCTGGCGG GCTCATGGAT AGAAGAATGG GATCCATAGA GCCGGGAGCC
GTCTGCCAGA CATGTGGAAA CAGGTTCACG AACTGCCCAG GGCACTTTGG ATACATAGAG
CTCGCGAGAC CCGTGATACA CCCGAGCTTC GCCCCATACA TAGCTATCCT TTTGAAGGCT
ACCTGCAACA GGTGCGGGAG GCTCAAGTTA CCCGAGGAGA AGATAAACAA GGCTAAGAAG
CGCATGGAGG TGTACTCCGC CAAGTGGCCA AGCCTGAAGA CGAAGTATGC TAACACCCTA
CTTAAAGAGG CGGCTAAGGC TACGGTATGC CCACACTGCG GCGCCCCCCA GTACAAAATC
AGACTGGACA AGCCGTACAC GTTCTACGAG GAGAGAGAGG AAGGGCTCGT AAAGCTTACA
CCGCTCGAGA TATGGGAAAG GCTTTCGCGC ATACCGGAGG GGGACTTAAG GGTTGTAGGG
ATAGACCCCA AGGAGGCTAG ACCCGAGTGG ATGGTGCTAC GCGTCATACC GGTTGTACCG
CCGTCTGTAC GCCCGTCGAT AACCCTGGAG AGCGGCGATA GAAGCGAGGA CGATCTCACG
CACAAGCTGG TCGACATAAT CCGGGTAAAC CAGAGGTTAA AGGAGAACAT AGACGCCGGA
TCTCCGTCGC TAGTCATAGA GGACCTCTGG AACCTACTCC AGTTCCACGT AGCAACGTAC
TTCGACAACG AGCTCCCCGG GATACCCCCC GCTAGACACA GGTCGGGCAG ACCCCTCAGA
ACCCTCGCGC AGCGCCTTAA AGGTAAGGAG GGGAGGTTCA GGGGGAGCCT GGCCGGCAAG
CGTGTCGACT TCTCCTCTAG AACAGTGATC TCTCCTGACC CGAACCTAAG TATAAACGAG
GTGGGCGTTC CCATAGACGT AGCAAAGGTT CTAACGGTCC CGGAGAAAGT TACCCCCTGG
AACATTGAGA AACTGAGGAA ACTCGTCATA AACGGACCAG ACGTATGGCC CGGGGCGAAC
TACATAATCA AGCCGGATGG GTCGAGGATA GACTTGAGAT ACGTCAAGCA CCGCGAGGAG
ATCTCCCAGA CGCTAAAACC CGGCTACATA GTGGAGAGGC ACCTGATGGA CGGCGACGTC
GTACTCTTCA ACAGGCAACC CTCTCTACAC AGGATCTCGA TAATGGCGCA CATAGTCAAG
GTACTTCCGT ACAAAACCTT CAGGCTTAAC CTTCTGGTAA CAATTCCCTA CAACGCGGAC
TTCGATGGAG ACGAGATGAA CCTTCACGTA CCTCAGAGCG AAGAGGCCCG CGCCGAGGCG
CGGGAGCTCA TGTTGGTACA GGAGCACATA ATGACGCCCA GGTACGGGGC TCCCATAATA
GGGGGTCTGC ACGATTACAT CTCCGGTAGC TACCTTCTAA CGAGGAAGGA CGCCTTGCTG
GACAAGAAGA GCGCCTTAAG GCTGCTCTAC ATCGGGAACA ACTGTGACCC GCTGGTGGAG
CCAGCCATAA TTAAGCCCGG ACCCTACTGG ACGGGGAAGC AAATTGTCAG CATGTTCCTC
CCGAAAGGAC TGAACTACGT TGGACGCGCA AGCGTTGCAC CTGCCTCTGG TAAGTGTGAC
GAGGAGTACT GCGAGAACGA CGGCTATGTT TTGATCAAAG ACGGGAAGCT ACTGCTCGGT
GTCTTTGATA AGCAGGCCAT AGGGGCGGAG AAGCACGGTA CGGTTCTGCA CGAGATCGTA
CGGGAGTTTG GAGTCGAAAA AGCGAAAGAA CTCATGGACG GCATGTTCAA GGTATTCATA
GCTTACCTGG ACATGCACGG TTTCACGATG GGGGTTGACA GCGTGGAGAT CCCGAGGGAA
GCCGAGGACG ATATCAGGGA GATACTGCAG GAGGCGGAGA AAAAGGTCGA GGACTTGATC
AGGCAGTACG AGAGCGGCGA GCTGCAGCCC ATGCCTGGGA AGACCCGCAA GGAGACCCTC
GAGGACTTGA TAATGAACGT GCTCGCAGAG GCGAGGACTC GGGCAGGCGA AGTCACGAGT
AAGCACCTAG GTCTGCTCAA CCACGCGGTT ATAATGGCTA AGACAGGTGC GAGAGGAAGC
ATGCTCAACT TGACGCAGAT GGCAGCGGTC GTCGGGCAGC AGTCAGTTAG AGGGAAACGG
ATAGAGAGAG GATACACCGG GCGAGCGTTA CCACACTTCG TTAAAGGCGA CCTCTCGCCG
CTCGCTAAGG GATTCGTTTA CAGCTCATTT CGCAGGGGCT TGTCCCCCGT GGAGTTCTTC
TTCCACGCAA TCTCCGGAAG AGAAGGACTC GTAGACACAG CCGTCAGGAC TGCCCAGTCC
GGGTACATGT ACCGCAGACT TCAGAGCGCA ATGCAGGACT TCTACGTATC GTACGACGGG
ACTGTCAGGA ATAGCGAGGG GATGATAATA CAGTTCAGGT ACGGCGAGGA CAGCGTTGAC
CCTGCGAGGA GCGACCACGG GAAACCCGTA GACGTTGATA AGTTGATAAA GAAGGTCTTG
ACACTAAGGG GTGAGAAGCG TGAGTGA
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| Protein sequence | MSTSTNPKIV AGIKFGILSP EMIRKIAVLR IETSELYDEE GFPIPGGLMD RRMGSIEPGA
VCQTCGNRFT NCPGHFGYIE LARPVIHPSF APYIAILLKA TCNRCGRLKL PEEKINKAKK
RMEVYSAKWP SLKTKYANTL LKEAAKATVC PHCGAPQYKI RLDKPYTFYE EREEGLVKLT
PLEIWERLSR IPEGDLRVVG IDPKEARPEW MVLRVIPVVP PSVRPSITLE SGDRSEDDLT
HKLVDIIRVN QRLKENIDAG SPSLVIEDLW NLLQFHVATY FDNELPGIPP ARHRSGRPLR
TLAQRLKGKE GRFRGSLAGK RVDFSSRTVI SPDPNLSINE VGVPIDVAKV LTVPEKVTPW
NIEKLRKLVI NGPDVWPGAN YIIKPDGSRI DLRYVKHREE ISQTLKPGYI VERHLMDGDV
VLFNRQPSLH RISIMAHIVK VLPYKTFRLN LLVTIPYNAD FDGDEMNLHV PQSEEARAEA
RELMLVQEHI MTPRYGAPII GGLHDYISGS YLLTRKDALL DKKSALRLLY IGNNCDPLVE
PAIIKPGPYW TGKQIVSMFL PKGLNYVGRA SVAPASGKCD EEYCENDGYV LIKDGKLLLG
VFDKQAIGAE KHGTVLHEIV REFGVEKAKE LMDGMFKVFI AYLDMHGFTM GVDSVEIPRE
AEDDIREILQ EAEKKVEDLI RQYESGELQP MPGKTRKETL EDLIMNVLAE ARTRAGEVTS
KHLGLLNHAV IMAKTGARGS MLNLTQMAAV VGQQSVRGKR IERGYTGRAL PHFVKGDLSP
LAKGFVYSSF RRGLSPVEFF FHAISGREGL VDTAVRTAQS GYMYRRLQSA MQDFYVSYDG
TVRNSEGMII QFRYGEDSVD PARSDHGKPV DVDKLIKKVL TLRGEKRE
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