| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0284 |
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| Symbol | |
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| ID | 4602094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 248050 |
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| End bp | 249261 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639773040 |
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| Product | DNA-directed RNA polymerase, subunit A'' |
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| Protein accession | YP_919697 |
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| Protein GI | 119719202 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02389] DNA-directed RNA polymerase, subunit A'' |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGAGC CTATAAGCGA GGAGGAGCTG TGGAACGAGA TCGAGAAGTA CCACGAGCTT
CTGCCCGCCT CTCTGCGCAG GGAACTCTAC GACAAAATAT TGAAGGCGGG GCTAAGCCGC
TCAGAGGCTC TCTCAGTGAT CAATGAGGCT CTCCGAAGAT ACCTGTCGAG CCTAGTCTCC
CCCGGCGAGG CAGTAGGCAT GGTGGCGGCA CAATCTATAG GCGAGCCCGC CACCCAAATG
ACCTTGAGGA CGTTCCACTT CGCCGGCGTA AGGGAGCTCA ACGTGACCCT GGGGCTTCCG
AGGCTTATCG AAATAGTGGA CTTAAGGCGC GAACCCTCAA CCCCCATAAT GGAAGTGTAC
CTGGAGCCGG AGCACGCCAA AGACCTCGAC TTCGCGTTGA AGATAGCCAG GGAGATCGAG
CTCACCACGA TGGAAAACCT CTGTAGCTCC ATAACCATAG ACTACTTCGA GTTCGCCATA
GTAATGGAGC TAGACCCAGA CATGATGGAG AACAGGGGCG TCACGATGGA TGACGTTATA
AACGCCCTGG AGAAGCTGAA GGGCAAGAAA GGGAAGATAG AAGTGAACGG TAATACCGTT
GTGCTCTACA CGGGGCTCGA GGATGTCACA AAGCTTAGAC GCATGTACGA CAGGGTCCTA
AACCTAAGAA TCAAGGGGTT AAAGGGTATC CGCCACGCCA TAGTCAAGCC GGTCAGGGAC
GAGAAGGGAG AGCTCGTCGA GTACGTGATA CTCACGGAGG GTAGCAACCT GAAGGCCGTT
CTTGGAATAG AGGGGGTAGA CCCGAGGAGA ACAACCACGA ACAACATACT CGAGATATAC
GAGGTGCTAG GCATCGAGGC GGCGCGGGCA GCCATAATAA AGGAGATAAA GAAGGTTCTC
GATGAACACG GACTCGACGT GGACTGGCGC CATATAATGA TGGTCGCCGA CGCGATGACT
TACTCCGGCA AGGTGCGGCA AGTGGGTAGG CACGGAGTAG CCGGGGAGAA GGGGAGCGTG
CTGGCGAGAG CCAGCTTCGA GGTGACGGTG AAGAACCTCG TAGAGGCAGC GCTTCGAGGA
GAGCTCGACG AGCTAAGGGG GGTCATCGAA AACGTGATTA TAGGTAGCAA GCCTATACCG
CTGGGTACTG GCTCAGTAAA GTTAAAAATG AGGTATGAGT TTGGACAGAG CGCGCAGAAA
GAGGTGCAGT AG
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| Protein sequence | MSEPISEEEL WNEIEKYHEL LPASLRRELY DKILKAGLSR SEALSVINEA LRRYLSSLVS
PGEAVGMVAA QSIGEPATQM TLRTFHFAGV RELNVTLGLP RLIEIVDLRR EPSTPIMEVY
LEPEHAKDLD FALKIAREIE LTTMENLCSS ITIDYFEFAI VMELDPDMME NRGVTMDDVI
NALEKLKGKK GKIEVNGNTV VLYTGLEDVT KLRRMYDRVL NLRIKGLKGI RHAIVKPVRD
EKGELVEYVI LTEGSNLKAV LGIEGVDPRR TTTNNILEIY EVLGIEAARA AIIKEIKKVL
DEHGLDVDWR HIMMVADAMT YSGKVRQVGR HGVAGEKGSV LARASFEVTV KNLVEAALRG
ELDELRGVIE NVIIGSKPIP LGTGSVKLKM RYEFGQSAQK EVQ
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