Gene Tpen_0274 details

Gene Information

• Locus tag: Tpen_0274
• Symbol: rps2P
• ID: 4601895
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: -
• Start bp: 241955
• End bp: 242599
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 639773029
• Product: 30S ribosomal protein S2
• Protein accession: YP_919687
• Protein GI: 119719192
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0052] Ribosomal protein S2
• TIGRFAM ID: [TIGR01012] ribosomal protein Sa(cytosolic)/S2(archaeal)

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCTCG ATGAGTTAAA GCTACTCGAA GGGCAACTGC TGATACCGCT GGAAATGTAC 
CTAGCAGCCG GTATAAGGAT AGGCACGAAG ATGAAGAGCA AGTTTATGGA GCCGTTTATA 
TACAGTGCAC GACCCGATGG TCTCTACCTT CTCGACGTGA AGAAGACTGA CGAGAGGATA 
AGGATAGCCG CCAAGATGAT AGCTAGGTAC GACCCGTCCA AGTTCGTCGT TGTTTCGGGT 
AGGCAGTACG GGCACCGCCC GGTTAGGAAG TTCTGCGGGC TTGTCGGATG TAAACCCATG 
CTTGGGAGGG TACTGCCTGG AACGTTCACG AACCCTGCTC TCTCCCACTT CACCGAGGCA 
GACCTGATGA TGGTTACGGA TCCGCGTGTC GACGAGCAGG CAGTTGTCGA GGCGGGAACG 
ATGGGTATAC CTGTTATAGC TCTGTGTGAT ACCGACTCTC CTATATCCAA CGTGGACTTG 
ATAATTCCGA CTAACAACCG TGGAAGGAAG GCCCTTGCGT TGATCTTCTG GCTACTAGCA 
CGGGAAGTCC TCAGGATACG TGGAGACATA CCGCCGAACG GAGAGCTCCC GGTACCGCTC 
TCCGACTTCG AAGCGAGGAT ACTTACTACC GGCGAAGTCG TGTAG 

 

Protein sequence

MSLDELKLLE GQLLIPLEMY LAAGIRIGTK MKSKFMEPFI YSARPDGLYL LDVKKTDERI 
RIAAKMIARY DPSKFVVVSG RQYGHRPVRK FCGLVGCKPM LGRVLPGTFT NPALSHFTEA 
DLMMVTDPRV DEQAVVEAGT MGIPVIALCD TDSPISNVDL IIPTNNRGRK ALALIFWLLA 
REVLRIRGDI PPNGELPVPL SDFEARILTT GEVV