| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0272 |
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| Symbol | |
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| ID | 4601893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 239839 |
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| End bp | 240924 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639773027 |
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| Product | isopentenyl pyrophosphate isomerase |
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| Protein accession | YP_919685 |
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| Protein GI | 119719190 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCGG ATATCATATT CACGAGGAAG GACCAGCACC TGGTATACTC GCTCAAGGAA
AACGTTCAGG CGCGCGGAGT AACCACTCTA CTTGAATGCG TCAGGTTTGT ACACCAGACT
GTACTCGAGG CAAACTTCTC CGATGTGGAC GTGTCCACGA AGTTCCTTGG ATACGAGGTC
GCGGCGCCTA TCGTCATCAG CGGGATGACA GGAGGCACCC CCATGGGTGG AAAAGTCAAC
GCCATGCTCG CCGAGGTTGC CCAGAGGTTG AAGGTACCCA TAGGCGTTGG TAGCCAGCGT
GCGGCACTGA AGGACAGGGC TGCCGTTGAG ACATTTAGAG TTGTACGCGA GAAGGCGCCG
GACGTACCGG TGATAGCCAA TATAGGGGCT AGCCAGGTAT CAATGGGCCT CAGTGCCGGC
GAGGTGCAGG AGTTGCTGGA CATGGTCGGC GCGGACGCGC TTGCCGTTCA CCTAAACCCT
CTGCAGGAGG TGCTTCAGCC CGAAGGAGAA CCCTCCTTCA AGAACTTCCT CGGAAACCTC
AGGGAGATCG TGAAGAGCGT AAAAGTCCCC GTGATTTTGA AGCAAACAGG GGAGGGCTTC
TCCAGGGAAT CCGCGCTGAA AATCGCCGAT ACGGGGGTAA AGGGGGTCGA CGTTGGAGGC
GCGGGGGGAA CATCCTTCGC GGTTATAGAG GGTTTAAGGG CGCGCTACGC GGGGCTCGAT
CTTCACGAAG AGATAGCCTT CGAGTTTGCA GGGTGGGGTA TCCCCACCGC GGCCAGCGTG
CTCGAAGTGC GCTCGGCGTT ACCAGACATA CTGCTCATCG CTACGGGCGG CATAAGAAGC
GGCTTGGACG CGGCTAAGGT GATCCGCCTT GGCGCAGATT TCGCCGGACT AGCCCTACCG
GTATTGAAGG AAGTGTACTA CAGGGGCGTC GAGGGGGGAT ACAGGTTCCT GGAGAAAGTT
ATCCGCGAGC TTAAGATAGC GGTTTTCCTC ACAGGTGGGC GGACTCTCGC AGACCTCAAG
AATGCGCCGA TCGTTATAAC CGGGGAGCTG AAGGACTGGG TGGTTCAGAG GGGGCTACGC
GTATAG
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| Protein sequence | MSSDIIFTRK DQHLVYSLKE NVQARGVTTL LECVRFVHQT VLEANFSDVD VSTKFLGYEV
AAPIVISGMT GGTPMGGKVN AMLAEVAQRL KVPIGVGSQR AALKDRAAVE TFRVVREKAP
DVPVIANIGA SQVSMGLSAG EVQELLDMVG ADALAVHLNP LQEVLQPEGE PSFKNFLGNL
REIVKSVKVP VILKQTGEGF SRESALKIAD TGVKGVDVGG AGGTSFAVIE GLRARYAGLD
LHEEIAFEFA GWGIPTAASV LEVRSALPDI LLIATGGIRS GLDAAKVIRL GADFAGLALP
VLKEVYYRGV EGGYRFLEKV IRELKIAVFL TGGRTLADLK NAPIVITGEL KDWVVQRGLR
V
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