Gene Tpen_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0271 
Symbol 
ID4601892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp239340 
End bp239837 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content53% 
IMG OID639773026 
Producthypothetical protein 
Protein accessionYP_919684 
Protein GI119719189 
COG category[S] Function unknown 
COG ID[COG1371] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGCGA TGCAGAAACG TTTATCGCCT GCTGTGAAGA AGGGGGTCGT GGAGGGTATG 
AGCGGGACGT GCGGGGGGTT CGAGCTTTTA CCCCATACTG CCGATATAAT GGTTAGGGCG
AAGGGAAGGT CCATAGAAGA GGCCTTTTCA AATGCTGCCG TAGGGATGTA CGAGGTTATG
ACGAGCGTAG CGTCCATAGA GCCTCTTGAA GACCGCGAAG TGGTAGCCGA AGGGTTTGAC
CTCGAGAACC TGCTTTACAA CTTCCTCGAG AATCTCCTCG TATTGCTCGA CACGGAGGGA
TTCCTCGTGT CACGAGTGAA AAGCTTGAGG ATAAGCAAGA CGGAGGAAGG CTACAGGCTT
ACCGCCGTGG TCTCCGGAGA GCGTTTCTCT CCAGATAAAC ACGAGTCCAG GGTTCTCGTA
AAGGCAATAA CCTACCACGA GATGAGGATT TACCGCGAAG ACAACTGCTA CGTCGTCGAG
TACGTCCCCG ACATTTAG
 
Protein sequence
MRAMQKRLSP AVKKGVVEGM SGTCGGFELL PHTADIMVRA KGRSIEEAFS NAAVGMYEVM 
TSVASIEPLE DREVVAEGFD LENLLYNFLE NLLVLLDTEG FLVSRVKSLR ISKTEEGYRL
TAVVSGERFS PDKHESRVLV KAITYHEMRI YREDNCYVVE YVPDI