| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0259 |
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| Symbol | rps13p |
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| ID | 4601676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 227856 |
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| End bp | 228329 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639773013 |
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| Product | 30S ribosomal protein S13P |
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| Protein accession | YP_919672 |
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| Protein GI | 119719177 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03629] archaeal ribosomal protein S13P |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCGGAG AGTTCAGGTA CATCGTACGA GTCGCAGGGG TGGACTTACC AGGAGATAAG
GCTCTCGTCT ACGCGCTAGC CGACATTAAG GGTATAGGAG TCTCGACAGC GCAGGCTGTA
GCCAAGAAGC TCGGACTCGA CCCCTACAGG CTTCTCGGCA CATTGAGCGA AGAGGAGGTG
GAGAAGCTCT CTGCTGCTCT CAGAGAGATA GAGAAGCTGG GGCTTCCACC GTGGATGCTC
AACAGGAGGA AGGACCCGTT TCTAGGCGTT GACCGTCACC TGATAACTTC AGACCTCTTA
ATCACGGTTA GAAACGATAT AGAGTTCATG AAGAAGATCA AGAGCTACAA GGGAGTTAGA
CACATGCTTG GACTTAAAGT CCGCGGACAG AGGACGAGGA CGACCGGCCG TACCGGGTTA
ACTGTCGGTG TTAAGAGAGG AAAGGAGAAA GCTCAGCAAC AGAAGGGTGG CTAG
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| Protein sequence | MSGEFRYIVR VAGVDLPGDK ALVYALADIK GIGVSTAQAV AKKLGLDPYR LLGTLSEEEV
EKLSAALREI EKLGLPPWML NRRKDPFLGV DRHLITSDLL ITVRNDIEFM KKIKSYKGVR
HMLGLKVRGQ RTRTTGRTGL TVGVKRGKEK AQQQKGG
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