Gene Tpen_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0253 
Symbol 
ID4601845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp223448 
End bp223996 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content53% 
IMG OID639773007 
Productprotein of unknown function, ATP binding 
Protein accessionYP_919666 
Protein GI119719171 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTCC AGCGAGGCTA TCTCAAGATA CTGGTTAGCG GTCCATATGC CAGCGGAAAG 
ACAACATTCG TAAGGACAGT GGCGGAAAAC GTACTCTCTA CAGAGGTGCC CGTAACCACC
CCCGGCGAGC AAAAAGTAAA GGAGTATACC ACGGTCGCTT TCGACTACGG AAAGCTGTAC
TTGGACGGAA TCCCGATATA CCTCTTCGGG ACTCCGGGTC AAACACGGCT ACAGTTCATG
TGGAGAGTGC TGGCCCAGGG CATGCACGGG TACCTGTTCC TCGTCGACGG AAGCTCGCTA
CTCGAAGTCT ACAGAGCCAG AGGCATTTAC ACGTATATGA AGAGCCTCGG CAACTACCCC
CACATTATAG CGGTAAACAA GCAAGACGTA AAGGGCTCCG TACCCCCAAG CCGGGTAGCA
TCGATATTCA ACGTAGACCC AGCTTACGTA GCTCCGCTGG TAGCGCGCGA TAAAGCCATG
GCCATAAGCG TACTTAAGAA GCTTGTCGAC CTCATCCTTA CGAGGAGAGA GGAAAGAGTC
GTTCCATAG
 
Protein sequence
MQVQRGYLKI LVSGPYASGK TTFVRTVAEN VLSTEVPVTT PGEQKVKEYT TVAFDYGKLY 
LDGIPIYLFG TPGQTRLQFM WRVLAQGMHG YLFLVDGSSL LEVYRARGIY TYMKSLGNYP
HIIAVNKQDV KGSVPPSRVA SIFNVDPAYV APLVARDKAM AISVLKKLVD LILTRREERV
VP