Gene Tpen_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0247 
Symbol 
ID4601474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp217693 
End bp218292 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content54% 
IMG OID639773001 
Producthypothetical protein 
Protein accessionYP_919660 
Protein GI119719165 
COG category[S] Function unknown 
COG ID[COG1628] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTAT CCAAGCCTGC CTTCCGAGTA CTGGGAGTTG CCGAGTGTTT CAGGAAGCGT 
GCCCGGAAAT CTGTGATCGC AGGGGTTGTC TGGAGGCGTG ACGGCTTTGT CGACGGTGTA 
TACCTATCCT TTGCGAGTGT AGGCGGGATG GACGCTACCG ACGCCATCGT CGATATGTAC 
CTGAGAAGCT CCAGGAGAGA CATAAACGTC ATCATGCTCA ATGGGTGCAT TATCTCGTGG 
TTTAACATAG CCGACCCAGA GAAAATATAC GAGAGAACGG GAATCCCCGT TATCTGCCTA 
AGCTACGAGG AATCGGAAGG CCTCGAAAAG TACATAGAGA AGTACTTCCC CGGAGACGTT 
CACAGAATGC GCGCCTACCA GTCGCTGGGT TCGAGAAGGC TAGTATACGT GAAGCCTGCG 
CGGACGTACG TTTATGTGCG TGCCTCCGGT ATAGCGATGG ACGAAGTATC GCGTATACTC 
AACGTTACTA CGAAGAGCGG CAAGGTCCCC GAGCCGTTGA GGGTTGCGCG GCAAGTAGCT 
AGAGCAGTAC ACTCGCTGCT CGAACGCGAA GACCCTCAAC TACTGGGGAT ACCGCTCTAA
 
Protein sequence
MLVSKPAFRV LGVAECFRKR ARKSVIAGVV WRRDGFVDGV YLSFASVGGM DATDAIVDMY 
LRSSRRDINV IMLNGCIISW FNIADPEKIY ERTGIPVICL SYEESEGLEK YIEKYFPGDV 
HRMRAYQSLG SRRLVYVKPA RTYVYVRASG IAMDEVSRIL NVTTKSGKVP EPLRVARQVA 
RAVHSLLERE DPQLLGIPL