| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0235 |
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| Symbol | rpl30p |
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| ID | 4600705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 211054 |
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| End bp | 211524 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639772989 |
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| Product | 50S ribosomal protein L30P |
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| Protein accession | YP_919648 |
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| Protein GI | 119719153 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01309] 50S ribosomal protein L30P, archaeal |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGCTGT ACCTGGTGAT AAGGCTTAGA GGTCAACCGG ATAGGAGGCC GGAAGAAGAA
AAGGCGCTCG AACTCTTAAG GCTACACAAA GTGTACCACG CTGTTCTCGT CAAGGACGAT
CCATCAATAA AGGGTATGCT GGAGAGGACG CTGTCCTCTG CTGTCACGTG GGGGGAGATA
AATAAGGAAA CACTCGTCGA GCTGTTGAAG AGAAGAGGGC GTATTACTGG CAACAAGAGG
CTAACAGAGG AGTACTTAAA GAAGATAGGG TTTAACAGCT TCGAAGAGCT CGCCGAGGCA
TTGATCTCCG GTAAGGTGTC CTTGGAGGAT CTGCCCGGTG TAAAGCCCGT GTTCAGGTTG
CGCCCCCCGA GCGGCGGCTT TAGGGGAACT ATTCGGCGCA ACATTAACGC CAGGGGCGAG
CTCGGCTACC GCGGAGCTGA TATAAACAAC CTTGTCCTCA GAATGCTTTA A
|
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| Protein sequence | MALYLVIRLR GQPDRRPEEE KALELLRLHK VYHAVLVKDD PSIKGMLERT LSSAVTWGEI
NKETLVELLK RRGRITGNKR LTEEYLKKIG FNSFEELAEA LISGKVSLED LPGVKPVFRL
RPPSGGFRGT IRRNINARGE LGYRGADINN LVLRML
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