Gene Tpen_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0231 
Symbol 
ID4600701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp207719 
End bp208540 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content53% 
IMG OID639772985 
Producthypothetical protein 
Protein accessionYP_919644 
Protein GI119719149 
COG category[S] Function unknown 
COG ID[COG2106] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCCGC CTTTGAAGCC AAGGCTGAAG AGGGCTGTAG CTGTACCTTC GAGCACTTTC 
TCTAATCTTA GTGAGCCTGC TAGAACTTTC CACGTTGCCC TCCTTGCGCG CGCAGTTACG
ATTTTCCGAG TAGAGGAGGT AGCTATCTAC CAGGAGTCAG GACACCCTTG TGCAGAACTT
AAGAGAATAC TAGACGCACT CGAGGTGCCG CAGTATCTCA GGAAGTACCT TGTTCCGAGA
TCGCGCGAGT ACAGGTACCT CGGGCTTGTT CCCCCGCTTA GGTCTCCGAG CCACCTTCTG
AGAGGAGAGG AAAGCGAGTA CAGAGAGGGT TACGTCGTTT CGCGCAGAGG AACTAAGGCG
TTAGTGGATG TTGGACTTGG AAACCCTGTC GAGGCAGAAG TTCCCACAGA CGCGGGTAGA
AGGGTTACGT TGCGTCGAGA GGGGGCAGGG TGGCGCTACG TCTCTCCGGA GGAGGTAAAA
GTGTACTGGG GCTACAGGAC TAAGTGCTAC AGCTCTTTGC GTGAGGCACT GGAACACTAC
AGGTCGCGGG GCTTTCTCCT CGTGGGCACA TCGAGGAAAG CCGCACCGGT ATCGCTGGTT
CTAGAGGAGA TAAAGAGAGA GGCTACTGCG AAAAACGGTG TCGCAGTGTT TTTCGGTACG
TGGAACAAGG GGCTTCAGGA AATCTCGGAG GAGGAGGGCT TTGAACTGGA ATCTTTTCTC
GACTTCATTG TTAACACTGC GCCTATCCAA GGCGTAAAAA CGATTAGAAC GGAGGAAGCC
GTCTACATTT CCCTCGCTAT TCTAAACCTG AACCTTGAAT AA
 
Protein sequence
MWPPLKPRLK RAVAVPSSTF SNLSEPARTF HVALLARAVT IFRVEEVAIY QESGHPCAEL 
KRILDALEVP QYLRKYLVPR SREYRYLGLV PPLRSPSHLL RGEESEYREG YVVSRRGTKA
LVDVGLGNPV EAEVPTDAGR RVTLRREGAG WRYVSPEEVK VYWGYRTKCY SSLREALEHY
RSRGFLLVGT SRKAAPVSLV LEEIKREATA KNGVAVFFGT WNKGLQEISE EEGFELESFL
DFIVNTAPIQ GVKTIRTEEA VYISLAILNL NLE