| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0227 |
|---|
| Symbol | rpl2p |
|---|
| ID | 4601217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 204696 |
|---|
| End bp | 205442 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639772981 |
|---|
| Product | 50S ribosomal protein L2P |
|---|
| Protein accession | YP_919640 |
|---|
| Protein GI | 119719145 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0090] Ribosomal protein L2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAGA GGTTGCTCGT ACAGAGGAGG GGGCGCGGAG GAAGTGTATT TAGGAATCCC
GGCTGGAAAC GCCTCGGGCC GGCCAGGTAT CCGCCTTACA ATCCCGAAGA GTTCAAGAAC
AAGGTGCTTG TCGGCGTTGT CAAAGACTTG CTCCACGAGC CGGGCCGCGG AGCCCCTCTT
GCACTGGTGG AGTTCGAGGA TGGCACAAAG ATGTACATGA TACCTCCTGA GGGGCTAGCG
GTAGGGCAAA AGATCTACTA TGGAGCAAAG GCTCCGGCAG TCCTTGGAAG CATAGTTGAG
ATAGGTAACG TGCCGGAGGG AACGATAGTT TCGAATATTG AGATAAGGCC CGGGGACGGC
GGGAAGCTGG CTAGGAGTAG CGGAGCCTAT GCGCTTGTAC TTGCGCACTC GAACGGCAAA
ACGCTTATAC AGCTTCCATC TAAGAAGGTT AAGGAGGTAT CCAGTGAGGC GAGAGCGACG
ATAGGCATGG TGGCCGCCGG TGGAAGGATA GAGAAACCTA TGCTTAAGGC GGGCAAGATG
TGGCATTGGT CTAGGGCTAA GTCGTTCAAG TACCCAACAG TTAGAGGAAA AGCTATGTCT
GCCTACGCCC ACCCGGCAGG AGGAGGTCAT CACCCCAAGG GCTTAACGCC AGCTCCTAGG
AACGCGCCGC CCGGCAGGAA GGTCGGTCAC ATCGCGCCCA GAAGGACTGG AAGAAAGAAA
GGAGCCTCCA GGACTCCGAC CCAGTAG
|
|---|
| Protein sequence | MGKRLLVQRR GRGGSVFRNP GWKRLGPARY PPYNPEEFKN KVLVGVVKDL LHEPGRGAPL
ALVEFEDGTK MYMIPPEGLA VGQKIYYGAK APAVLGSIVE IGNVPEGTIV SNIEIRPGDG
GKLARSSGAY ALVLAHSNGK TLIQLPSKKV KEVSSEARAT IGMVAAGGRI EKPMLKAGKM
WHWSRAKSFK YPTVRGKAMS AYAHPAGGGH HPKGLTPAPR NAPPGRKVGH IAPRRTGRKK
GASRTPTQ
|
|---|
| |