Gene Tpen_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0217 
Symbol 
ID4601810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp195260 
End bp196309 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content58% 
IMG OID639772971 
ProductRNA-3'-phosphate cyclase 
Protein accessionYP_919630 
Protein GI119719135 
COG category[A] RNA processing and modification 
COG ID[COG0430] RNA 3'-terminal phosphate cyclase 
TIGRFAM ID[TIGR03399] RNA 3'-phosphate cyclase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAGA TAGATGGCTC CATGGGGGAG GGGGGCGGGC AGCTACTCCG GTACAGCATA 
GCTCTCTCTG CGATAATGAA TGTGCCGCTA AGGATATACA ACATAAGGGC TAAAAGGGAC 
CCGCCCGGCC TTAGGCCTCA ACACCTAACG GCACTCAAGT TCATAGCCGA GCTTGTCAAA 
GGGGAGGCCG AAGGTCTAAG AGTTGGATCC ACAGAGGTTA AGTTCGTGCC AAGGCTGAGA 
AGACCTGCAC CAGGCAAGTA CGTCGCCGAT ATAGGTACAG CTGGAAGCGT AACCCTTCTC 
CTGCAAGCCT CCCTACCTGT CCTACTGGCC GCTGAAGGCA AGGTAGGCCT AGAGGTGAGA 
GGGGGAACGT CGGTGAGGTG GAGCCCTCCC TACAGGTACT TCGAAAACGT ACTCATCCCC 
TTGATCTCGA AGTTCGGAGC GAAGATCAGT AGCAAGTTGT TGCGCGAAGG CTTCTACCCA 
GAGGGTGGAG GCGCCGTTTA CGTTGAGACT ACGCCGGGCT ACCCCCTTGA ACCCATAAAC 
CTCACCGCGA AGTCTACGCC CGGCCCTGTC GAAGGGGCAT CTTACGTGGG GAACCTCCCG 
TGCCACATAG CTGAGAGACA GGCGCGGTCA GCGAGAGAAC GCATAGAGAG TGCTGGCTTC 
AACGTGGGCA AGGTGAACGT GGTTTGCAAC CAGCCAGCCA CCGGTAGGGG GTCCGGGATA 
GTCCTATGGG CGAGAGTCGG CGAGGGGGTT GTAGGTTCGG ACGCGCTGGG AGAGCGTGGA 
AAGCCGGCGG AGGACGTTGG ACGCGAGGCT GCCGAGCGGC TCCTGCCCAT CCTCAAAGCT 
GGAGCGCCGG TTGACCCTCA CGCATCGGAC AACCTAGTCA TATACATGTC TCTAGCCAGG 
GGGGAGTCGG CGATACTCAC CACCGAGCTG ACGTCCCACG CGGAAACAGC TTTAGAGCTG 
TGCAGGCAGA TAACAGGGGC TACCTACACC GTGGAAAGAA CGGGCAACGG CGTTCTCATA 
AAGGTCAAGG GAGTAGGGTA CTCGCCGTAG
 
Protein sequence
MIEIDGSMGE GGGQLLRYSI ALSAIMNVPL RIYNIRAKRD PPGLRPQHLT ALKFIAELVK 
GEAEGLRVGS TEVKFVPRLR RPAPGKYVAD IGTAGSVTLL LQASLPVLLA AEGKVGLEVR 
GGTSVRWSPP YRYFENVLIP LISKFGAKIS SKLLREGFYP EGGGAVYVET TPGYPLEPIN 
LTAKSTPGPV EGASYVGNLP CHIAERQARS ARERIESAGF NVGKVNVVCN QPATGRGSGI 
VLWARVGEGV VGSDALGERG KPAEDVGREA AERLLPILKA GAPVDPHASD NLVIYMSLAR 
GESAILTTEL TSHAETALEL CRQITGATYT VERTGNGVLI KVKGVGYSP