Gene Tpen_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0216 
Symbol 
ID4601809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp194459 
End bp195250 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content55% 
IMG OID639772970 
Producthypothetical protein 
Protein accessionYP_919629 
Protein GI119719134 
COG category[S] Function unknown 
COG ID[COG1912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACAGCG CACGAATAAT AGCATTTCTC TCGGACTTTG GGACTAGGGA CTACTACGTT 
GGAGCCGTGA AAGCTGTGGT GCACTCTCTT TGCCCTCAAA GCACCGTAGT AGACGTGACT
CACGAAGTCG AACCCTGGTC GGTCGAAGAC GCTTGCTACA TCCTTAGGTG TTGCTACGAC
GATTTCCCGA GCAGAACAGT CTTCCTGGTA GTCGTGGACC CAGGCGTAGG TACATCGAGG
AAAGCCATCA TCCTCGAGCA CAAGGGCTAC CTCTTCGTAG GCCCCGATAA CGGGCTTCTA
CCCTGCGCCG TTGGAAACAA GGAGTTTAAA GCCTGGGAAA TCCTACGCGT ACCAGGAGCC
CGAAGAAAGA CGTCGCACAC TTTCCATGGA AGAGACGTTT TTGCCCCGGT AGCCGCATTT
CTATCGTGCG GCGGGAGGCC CGAAGAGATC GGTCGAGAGT ACGCGGACCC CGTTTTAATG
GATATCGAGG AGACTATCCT CGAGGAAGGC TGGGTGAAGG CAAGAGTCAT TCACGTCGAC
AGGTTCGGGA ATGTCGCGCT CGGCGTTAGG CCCGAGAAAT TCTTCCGGGA GTACGGTCCT
ACGAGAATCA GAGTAGCCTT CGATGATCAC GAGGTAGACG TACCCTTCGT TCGCACTTTT
GGGGACGCGC CTCGCGGGTC GCTGGTAGCG CTCGTGAACA GTTGCGGGTA CCTCGAGCTG
GCTGTCAACA TGGGAAATGC TTCCGAGGTG CTCGGGTTGA AGCCTGGAAG AATCGTGAAG
ATAAAGTTCT AG
 
Protein sequence
MDSARIIAFL SDFGTRDYYV GAVKAVVHSL CPQSTVVDVT HEVEPWSVED ACYILRCCYD 
DFPSRTVFLV VVDPGVGTSR KAIILEHKGY LFVGPDNGLL PCAVGNKEFK AWEILRVPGA
RRKTSHTFHG RDVFAPVAAF LSCGGRPEEI GREYADPVLM DIEETILEEG WVKARVIHVD
RFGNVALGVR PEKFFREYGP TRIRVAFDDH EVDVPFVRTF GDAPRGSLVA LVNSCGYLEL
AVNMGNASEV LGLKPGRIVK IKF