| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0208 |
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| Symbol | |
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| ID | 4602219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 187076 |
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| End bp | 188113 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639772962 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_919621 |
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| Protein GI | 119719126 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | [TIGR02371] alanine dehydrogenase, Archaeoglobus fulgidus type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.118382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCATGTCA AAGTCCTCCG CGCGGAAGAC GTAGCCCATG TAATCAGAGA AGTTGGGCTG
AACACTTTCT TAGACGGGCT TATAAATAGG CTGGAGGAGG TCTTTAGAAG GTGGCGAGAG
CTCAAAGTCG TTCCACGCGT CAGCTTTCAC TACGCGTCTG GCGTTATGGA GGCAATGCCG
GCCAGCGATG CAAGGTGGTA CTCCGTCAAG ATCGTTAACG GCCACCCGGG TAACCCTTTG
AGAGGCTTAC AAACAGTGGT GGCAGTGGGG GTACTCGCTG ACGTGGAGAC AGGTTACCCC
GTGATGATCG CGGACGCCAC CCTTCTAACA GCTCTGCGCA CTGGTGCTAC CAGCGCTCTG
GCAACGAAGT ACCTCGCGAG ACGAGGGTCG GAGAACCTCG GAATTATAGG GACGGGAGCT
CAGTCCGAGT TCCTCGTATA CTCTATTTCG AGGGTTGCGA ATAGCGTCGA GAAAGTCTTC
TTTTACGATA TAGATCCGAA AGCAATGGAG AAGTTCGAGA AGAACATTTC GAGGCTGGGG
TTCGAGCTTG TAAGAGCGGG TAGCCCCCGT GAGGTCGCGC TTAACTCCGA TGTATTAGTG
ACCGCTACGA CCTCCAAGGG TAAAGACCGC GTAGTCCTAA ACGAATGGGT ACGCCCTGGT
ACCCATATCA ACGCCGTAGG CGGCGATGCT CCGGGAAAAA CGGAGTTAGA TCCTGCGATA
CTTTTGAGGT CTAAGCTCGT CGTAGAGCTC CTCGAGCAAG CGATTGTGGA GGGGGAAACG
CAGAGCGTCG GTAGGGATGC TGTTTACGCG GAGCTTTGGG AGGTTGTGTC AGGGCTGAAA
CATGGACGTT CGAGTGAGGA GGAAGTCACC GTGTTCGACT CCGTGGGAAT CGCGGTGGAA
GACTTAGCAA CACTGACGTA TCTCTACGGC TTAGCAGAGA GGATGCAGGT GGGCCTGGAC
TTAGAGCTCT TTCCTAGGCT TTCAGATCCC AAGGACTTGT TCTTCACGCT GATAAGCGAT
GCTGGTCAAC GGGCATAG
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| Protein sequence | MHVKVLRAED VAHVIREVGL NTFLDGLINR LEEVFRRWRE LKVVPRVSFH YASGVMEAMP
ASDARWYSVK IVNGHPGNPL RGLQTVVAVG VLADVETGYP VMIADATLLT ALRTGATSAL
ATKYLARRGS ENLGIIGTGA QSEFLVYSIS RVANSVEKVF FYDIDPKAME KFEKNISRLG
FELVRAGSPR EVALNSDVLV TATTSKGKDR VVLNEWVRPG THINAVGGDA PGKTELDPAI
LLRSKLVVEL LEQAIVEGET QSVGRDAVYA ELWEVVSGLK HGRSSEEEVT VFDSVGIAVE
DLATLTYLYG LAERMQVGLD LELFPRLSDP KDLFFTLISD AGQRA
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