Gene Tpen_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0194 
Symbol 
ID4600803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp171837 
End bp172406 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content57% 
IMG OID639772948 
Producthypothetical protein 
Protein accessionYP_919607 
Protein GI119719112 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.45339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCAA CCTGCTTCGA GGTTCGCGGG CTGAGCATAC GGTTGGCGCA GTGCGACATT 
ACGGAGGCAG ACACTGAGGC AATAGTGAAC GCCGCAAACA GCTACCTTAA GCACGGAGGC
GGCGTCGCTC TGGCTATAGT GAGGAAAGGG GGCGACGTTA TTCAGCGTGA AAGCGATGAA
TGGGTTAAAA GGTACGGCCC GGTCCCCGAA GGGGAAGTCG CGGTTACGGG TGCCGGGAAG
CTTAAAGCGA AGTACGTGAT CCACGCAGTG GGACCGAAGT ACGGCGACCC CCTAGGAGAC
GAGAAGCTAG CAAGAGCGAT CTCCAACTCG TTGCTTAAAG CAGAGGAGCT GGGCCTGAAG
AGCATAGCCT TGCCTGCAAT CTCGACCGGC GTCTTCGGGT ACCCGTACCG CAGATGCGCA
GAGATAATGG CCGACGTATT CCTGGCAACT GCGGGTAAGC TGAAAAGCCT GAGAACAGTT
CTAGTCTGTC TCTGGGGGTC CGAGGCGTAC GAGGCTTTCC GCAGCGTATT CCTCGAAAAA
CTACGAGACT ATATCTCGTC CTGCCCGTAA
 
Protein sequence
MQATCFEVRG LSIRLAQCDI TEADTEAIVN AANSYLKHGG GVALAIVRKG GDVIQRESDE 
WVKRYGPVPE GEVAVTGAGK LKAKYVIHAV GPKYGDPLGD EKLARAISNS LLKAEELGLK
SIALPAISTG VFGYPYRRCA EIMADVFLAT AGKLKSLRTV LVCLWGSEAY EAFRSVFLEK
LRDYISSCP