| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0186 |
|---|
| Symbol | |
|---|
| ID | 4600799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 161935 |
|---|
| End bp | 162573 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639772940 |
|---|
| Product | NADH-ubiquinone oxidoreductase, chain 4L |
|---|
| Protein accession | YP_919599 |
|---|
| Protein GI | 119719104 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4237] Hydrogenase 4 membrane component (E) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGGTT TGGAGAAGAG TATAGGAGCT TGTGCGGCGT TAATGGTGCT AACAGCGAGC
TACATTAACG AGGAGCGGAA TCTAAGGAGG GCGACCTATG CCTACTGCGT TCAGACGCTT
TTGCTGGCCT CGATATTTTT CATGCTTTCA ACAGTTGAGT GGTACTTTGC ACTGTGGGGC
CTCACCGCCA TACTAACAAA GGCCGTCCTA GTTCCCTACT TCATACTTAG AACCACGAAG
CGTGTCGATG CCGTTGTCGA GGAGGAGCCG TACCTCGGCG GGTGGGCGAG CCATATACTC
CTGGGCGCGC TAATAGCCAT AGGATTCGCC ATTGGCACGA GAATAGTCTC CGGCTGGGAG
AGCGTACCCC TCTCGGTCTC CGTTGCGCTG TTCCTGATAG GCTTACACCT CATGGTTACA
CGTAGGGACG CGTTAAAGCA AATCCTAGGG ATATGCCACT TCGAGAACGG CTCGCACCTT
ACGCTGGCAG TTATGGCCCC AGGTCTGCCA GAAACAGTCG AAGTCGGCGT ATTGACGGAC
GCGGTTCTAC TTGTGCTCGT ATGTTGCCTG CTTGCAGAGG AGATGAAGAA AGTTGTTGGA
ACACTCGATA CCGGGAGGCT TTCGTTACTA AGGTACTGA
|
|---|
| Protein sequence | MLGLEKSIGA CAALMVLTAS YINEERNLRR ATYAYCVQTL LLASIFFMLS TVEWYFALWG
LTAILTKAVL VPYFILRTTK RVDAVVEEEP YLGGWASHIL LGALIAIGFA IGTRIVSGWE
SVPLSVSVAL FLIGLHLMVT RRDALKQILG ICHFENGSHL TLAVMAPGLP ETVEVGVLTD
AVLLVLVCCL LAEEMKKVVG TLDTGRLSLL RY
|
|---|
| |