| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0183 |
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| Symbol | |
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| ID | 4600885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 157287 |
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| End bp | 158990 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639772937 |
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| Product | NADH dehydrogenase (ubiquinone), 30 kDa subunit |
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| Protein accession | YP_919596 |
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| Protein GI | 119719101 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit
[COG3262] Ni,Fe-hydrogenase III component G |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAATG GGATGGAGAG ACTAGAGGAA AAGATCAGAA AGGAAATCGG AGGGCTGTTA
CTAGGAGTTG AGAAACCTTA TCCCGATCAG CTATACCTAT ACGTCGAGAG GACGAAGCTC
CCAGAAGTCT GCTCGTACGT TTACTACGAG CTGGGAGGCT TCCTCTCTAC CATGGCCGGA
AGTGACGAGA GGAGCCTGCA CGGAGCGTAT AGACTCTACT ACGTTTTCTC CATAGAGGAG
GGTTACGAAG ATGGCAAGAA ACCGTGGGTT GTGGTAGTAA CGAATATACC GCCCCACGAT
ACGAAGTTCT CCTCAGTAAC GCCCAAGATT CCCGCGGCTT CCTGGTACGA GAGGGAGGTG
AGAGACCTCT TAGGGCTAGT TCCCGAGAAC CATCCGGATC CGCGCAGACT GGTATTGCCC
GACGACTGGC CCGAGGGTGT TCATCCTCTT AGAAAGGAGT TCACGTACAC GGAGAGGCCT
CCTAGCGTAG CTAGAAAGTG CGAGTTTAGA CCGAGCGTAG AAGGAGAAGG CATAATGCAA
GTGCCTATAG GCCCCGTACA CGCCGTTGCC GACGAGCCCG GGCAGTTCAG AGTGTTCCTT
GATGGAGAGA AGGTAGTCGA CGTCGACTAC AGGATGTTCT ACGTCCACCG CGGCATTGAA
AAACTCGCGG AGAGCAGGCT GACCTACAAC CAAGTACCGT TCATCGCGGA GAGAATATGT
GGCATATGCG GGTATGCTCA TTCGTGCGCG TACTGCCAGG CAGTCGAGCA GGCGCTAGGC
ATAGAGGTTC CAGAGAGGGC ATTGTACATA AGGACGCTCA TGCTGGAGGT GGAGAGGCTG
CACAGCCACC TGCTGAACTT AGGCCTAGCA TGCCACCTCG CGGGCTTCGA CTGGGGCTTC
ATGGCCTTCT TCAAGGCTAG AGAGAAAGTA ATGTACATGG CAGAGCTCCT CACGGGCGGC
AGGAAGACTT ACGGTATGAA CGTGGTCGGG GGCGTGAGAA GGGACATAAC CGAGGACAGA
GCGAAGAAGG CCCTCGAAAT CCTGAAGGAA GTGGAAAAGG AGTATAAGGC TGTCCTAGAC
GCTGTTCTCA GCACGTCTAC GCTTGTAAGC CGCGCAAAGG ACGTTGGAGT ACTGCCTAGG
GACGTCGCAA GAAAGGTCAG CGTGGTTGGA CCGGTTGCCC GCGGCTCTTC GATAAAGAGG
GACACGAGGA AGGATCACCC CTACGCCGCG TACAGCGAGG TGGACTTTAA GGTCCCAGTG
CACAGCGAGG GAGACGTCCT CGCGAGACTC AGCGTAAGAG CCGAGGAAAC TTTCGAAACC
ATAAGTATCA TTAGGCAGGT GCTTGAGAAC ATGCCGGGAG GACCTATACA AGCCGAGGTG
AAGGAGTACA GACCTTACGC CAGGGGACTG GGCTACGTTG AAGCTCCGAG AGGTGAAGAC
GTGCACTTTG TCATAACCGG CCCGCACAGC AAGGTTTACA GGTGGAGGGT GAGAGCCTCA
ACGTACAATA ACTGGCCGGC AATACCCTAC ATGTGCCGAG GCTATACGCT GGCAGATCTC
CCGTTGATAA TTGGGAGCAT TGACCCCTGC TATAGTTGTA CGGAGAGAGT GATCGTTGTG
GACGTAAAGA GTGGGAGGAC CCGCGTTTTT CCGTACGAGT ATTTGGTTTC TCTCTCTCGT
AAAGGTGGTA AGCCATGGGC ATAA
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| Protein sequence | MNNGMERLEE KIRKEIGGLL LGVEKPYPDQ LYLYVERTKL PEVCSYVYYE LGGFLSTMAG
SDERSLHGAY RLYYVFSIEE GYEDGKKPWV VVVTNIPPHD TKFSSVTPKI PAASWYEREV
RDLLGLVPEN HPDPRRLVLP DDWPEGVHPL RKEFTYTERP PSVARKCEFR PSVEGEGIMQ
VPIGPVHAVA DEPGQFRVFL DGEKVVDVDY RMFYVHRGIE KLAESRLTYN QVPFIAERIC
GICGYAHSCA YCQAVEQALG IEVPERALYI RTLMLEVERL HSHLLNLGLA CHLAGFDWGF
MAFFKAREKV MYMAELLTGG RKTYGMNVVG GVRRDITEDR AKKALEILKE VEKEYKAVLD
AVLSTSTLVS RAKDVGVLPR DVARKVSVVG PVARGSSIKR DTRKDHPYAA YSEVDFKVPV
HSEGDVLARL SVRAEETFET ISIIRQVLEN MPGGPIQAEV KEYRPYARGL GYVEAPRGED
VHFVITGPHS KVYRWRVRAS TYNNWPAIPY MCRGYTLADL PLIIGSIDPC YSCTERVIVV
DVKSGRTRVF PYEYLVSLSR KGGKPWA
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