Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0183 |
Symbol | |
ID | 4600885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 157287 |
End bp | 158990 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639772937 |
Product | NADH dehydrogenase (ubiquinone), 30 kDa subunit |
Protein accession | YP_919596 |
Protein GI | 119719101 |
COG category | [C] Energy production and conversion |
COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit [COG3262] Ni,Fe-hydrogenase III component G |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAATG GGATGGAGAG ACTAGAGGAA AAGATCAGAA AGGAAATCGG AGGGCTGTTA CTAGGAGTTG AGAAACCTTA TCCCGATCAG CTATACCTAT ACGTCGAGAG GACGAAGCTC CCAGAAGTCT GCTCGTACGT TTACTACGAG CTGGGAGGCT TCCTCTCTAC CATGGCCGGA AGTGACGAGA GGAGCCTGCA CGGAGCGTAT AGACTCTACT ACGTTTTCTC CATAGAGGAG GGTTACGAAG ATGGCAAGAA ACCGTGGGTT GTGGTAGTAA CGAATATACC GCCCCACGAT ACGAAGTTCT CCTCAGTAAC GCCCAAGATT CCCGCGGCTT CCTGGTACGA GAGGGAGGTG AGAGACCTCT TAGGGCTAGT TCCCGAGAAC CATCCGGATC CGCGCAGACT GGTATTGCCC GACGACTGGC CCGAGGGTGT TCATCCTCTT AGAAAGGAGT TCACGTACAC GGAGAGGCCT CCTAGCGTAG CTAGAAAGTG CGAGTTTAGA CCGAGCGTAG AAGGAGAAGG CATAATGCAA GTGCCTATAG GCCCCGTACA CGCCGTTGCC GACGAGCCCG GGCAGTTCAG AGTGTTCCTT GATGGAGAGA AGGTAGTCGA CGTCGACTAC AGGATGTTCT ACGTCCACCG CGGCATTGAA AAACTCGCGG AGAGCAGGCT GACCTACAAC CAAGTACCGT TCATCGCGGA GAGAATATGT GGCATATGCG GGTATGCTCA TTCGTGCGCG TACTGCCAGG CAGTCGAGCA GGCGCTAGGC ATAGAGGTTC CAGAGAGGGC ATTGTACATA AGGACGCTCA TGCTGGAGGT GGAGAGGCTG CACAGCCACC TGCTGAACTT AGGCCTAGCA TGCCACCTCG CGGGCTTCGA CTGGGGCTTC ATGGCCTTCT TCAAGGCTAG AGAGAAAGTA ATGTACATGG CAGAGCTCCT CACGGGCGGC AGGAAGACTT ACGGTATGAA CGTGGTCGGG GGCGTGAGAA GGGACATAAC CGAGGACAGA GCGAAGAAGG CCCTCGAAAT CCTGAAGGAA GTGGAAAAGG AGTATAAGGC TGTCCTAGAC GCTGTTCTCA GCACGTCTAC GCTTGTAAGC CGCGCAAAGG ACGTTGGAGT ACTGCCTAGG GACGTCGCAA GAAAGGTCAG CGTGGTTGGA CCGGTTGCCC GCGGCTCTTC GATAAAGAGG GACACGAGGA AGGATCACCC CTACGCCGCG TACAGCGAGG TGGACTTTAA GGTCCCAGTG CACAGCGAGG GAGACGTCCT CGCGAGACTC AGCGTAAGAG CCGAGGAAAC TTTCGAAACC ATAAGTATCA TTAGGCAGGT GCTTGAGAAC ATGCCGGGAG GACCTATACA AGCCGAGGTG AAGGAGTACA GACCTTACGC CAGGGGACTG GGCTACGTTG AAGCTCCGAG AGGTGAAGAC GTGCACTTTG TCATAACCGG CCCGCACAGC AAGGTTTACA GGTGGAGGGT GAGAGCCTCA ACGTACAATA ACTGGCCGGC AATACCCTAC ATGTGCCGAG GCTATACGCT GGCAGATCTC CCGTTGATAA TTGGGAGCAT TGACCCCTGC TATAGTTGTA CGGAGAGAGT GATCGTTGTG GACGTAAAGA GTGGGAGGAC CCGCGTTTTT CCGTACGAGT ATTTGGTTTC TCTCTCTCGT AAAGGTGGTA AGCCATGGGC ATAA
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Protein sequence | MNNGMERLEE KIRKEIGGLL LGVEKPYPDQ LYLYVERTKL PEVCSYVYYE LGGFLSTMAG SDERSLHGAY RLYYVFSIEE GYEDGKKPWV VVVTNIPPHD TKFSSVTPKI PAASWYEREV RDLLGLVPEN HPDPRRLVLP DDWPEGVHPL RKEFTYTERP PSVARKCEFR PSVEGEGIMQ VPIGPVHAVA DEPGQFRVFL DGEKVVDVDY RMFYVHRGIE KLAESRLTYN QVPFIAERIC GICGYAHSCA YCQAVEQALG IEVPERALYI RTLMLEVERL HSHLLNLGLA CHLAGFDWGF MAFFKAREKV MYMAELLTGG RKTYGMNVVG GVRRDITEDR AKKALEILKE VEKEYKAVLD AVLSTSTLVS RAKDVGVLPR DVARKVSVVG PVARGSSIKR DTRKDHPYAA YSEVDFKVPV HSEGDVLARL SVRAEETFET ISIIRQVLEN MPGGPIQAEV KEYRPYARGL GYVEAPRGED VHFVITGPHS KVYRWRVRAS TYNNWPAIPY MCRGYTLADL PLIIGSIDPC YSCTERVIVV DVKSGRTRVF PYEYLVSLSR KGGKPWA
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