Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0152 |
Symbol | |
ID | 4600644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 129621 |
End bp | 130232 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639772906 |
Product | hypothetical protein |
Protein accession | YP_919565 |
Protein GI | 119719070 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4998] Predicted endonuclease (RecB family) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.45662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACGCGCG GGGTATGGGT GGAGGCATTG GCGCGCCTAA TCTTAGAGCT CGAAGGGTTC TCCGTAGAGC AAACCCGCCT GAGGCTTGAG AGGAACGGCG TAAGCCTAGC GGAGGTAGAC ATCCTCGCTA GGAAGAACGG CGAGGCGTAC GCCGTTGAGG TGAAGTCCGG GAGGGTCTCT GTTACAGACG TAAGGCAGGT ATACGCGAAC GCCGCGCTCC TCGGAGCCAA GCCGCTCCTC ATCGCGAGAG GCTTCTCCGA TGAAGCCGCA AAAGCTACGG CCGAAGAGCT GGGCGTAAAG GTGCTACTCA TACCCGACTA CGTCTACTTC GTCGACACAG AGGAGCTCCT ACGCCTAGTG GAGGAAGCAG TAGCGCTGAC GTTGGAAAAA CTGCTCTCTG TAAGCCCGGC GAACCTGTCC CCACCGGAGG TAGAAGTCGT GAAAGCAATC GCCTCTTCAA GCTCATTCGA GGAAGCTGCG AGGAGGCTCG GCGTGTCCAC GGATGCGCTC GGGAAAGCCG TAGAAGCGCT CAGAGAGAAG GGGGCAATAA CTCTCCACTC GCCCTTCAGG CTTCTACGGC TTCAGTGCAA GCTCCTCCTA CTCTCGCTAT AA
|
Protein sequence | MTRGVWVEAL ARLILELEGF SVEQTRLRLE RNGVSLAEVD ILARKNGEAY AVEVKSGRVS VTDVRQVYAN AALLGAKPLL IARGFSDEAA KATAEELGVK VLLIPDYVYF VDTEELLRLV EEAVALTLEK LLSVSPANLS PPEVEVVKAI ASSSSFEEAA RRLGVSTDAL GKAVEALREK GAITLHSPFR LLRLQCKLLL LSL
|
| |