| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0147 |
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| Symbol | |
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| ID | 4600639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 122079 |
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| End bp | 123503 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639772901 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_919560 |
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| Protein GI | 119719065 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.114503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCAGCA GGCCGGTCTC CGGGATTAAG GCCACGCTGA AAGAGCTACT CACTTACAAG
TCTGGAGTGT TGGGGCTTGC GATACTAGCC TTCCTAGTAG CATTTTCTAT CTATGCCGTG
GTCACCATCC CTTACGACCA GGCTATAAAG CTTTGGAGAG GCTCGGAGGA TATATGGATC
GAGAATCCCC GAGCTGTGCC TCCAGAGTGG TGGGAGATCT TTGTCGGGAG GAAGCTTCCG
CGCACGATAA AGCTTGACTC GAGGATTCAG ACGTTCGGGG TCTCGAAAGC CGTAACGCCG
ATAGCTGGAA CTGACATGAA GCTAGTGTCC ATTAGCTTTA TGTTCGACTA CCAATACGAC
GACTACCCAT CCGAGCTAAA CATATTCTTC CACGCTAAGT ACACGAAGGA TCCACCTATA
GTGAAGATAA CAATCCAGAG GCCGGACGGC TTAACCTTGG AAATACCCCG CTTCTCGCTA
AGAGCTCCTA ATGACTCTCT TTACTACTCG ATAAGCGAGG AAGTTAGAAA AGCTCTCGCG
CTCTACGCCG CCACGAAGTA CGGTGCCAAC GTCTCCGACC TACTTGACCA GCTCGAACTA
ACCTTTGGAA AGTACTCGCG CGAAGGCCTC GAAAAGGGCA ACCTTCCCGT CGAGAAAGGT
ATTTACAGGA TGAACATAGA GGCTACTTGC TTCGGTGAAG ACTCGGACCT GGAAGCCAAG
GTTGTAATAT ACGGTCAGGT CTACGGCCCC GCTGGCACGG ATAACCTGCG CAGGCCACTG
GAGATAGCCT TGCTGTGGGG CGCGCCGGTA GCCTTGGCGT TCGGGTTGAC GGCGTCTCTC
GTCACGTCTA TGTTACAGAT GATCATAGCG ACGATAGGTG CTTGGTACGG CGGCGTAGTA
GACTCGGTGA TTCAGAGGAT AACCGAAGTA TACATGATCC TACCGTTCCT GCCGTTCCTT
ATAATAATAG CGGCGTTCTA CAAGGTGGAC ATCTGGGTTA TCCTGACCGT GGTCATAGTG
CTCAGTATCT TCGGAGCGGG CATTAAGAGT ACGAGGGCGC TCGTGCTGTC CATAAAGGAG
TACCCCTACA TAGAGGCGGC GAAGGCTTAC GGAGCCTCCG ACTGGAGGAT AATCTTCCTC
TACATAATCC CGAAGATCAT TCCGCCGATA GTCCCCGGGC TTATTGGTGC CGTTCCCGGC
TACGTCTTCC TGGAAGCTGC TCTCTCGTTC CTCGGTCTGG GCGACCCCTT CTTACCTACG
TGGGGCAAGG TTCTGAATGA CGCGTATAAC GGTGGCGCGC TGTACAGGGG GTACTACTAC
TGGGTATTGG AGCCCTCTAT ACTGCTCATG CTGACGGCCT TCGCCTTCGC ATTCCTGGGG
TTCGCGCTGG ACCGAATCGT CAACCCGAGG CTTAGGGAGA TGTGA
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| Protein sequence | MSSRPVSGIK ATLKELLTYK SGVLGLAILA FLVAFSIYAV VTIPYDQAIK LWRGSEDIWI
ENPRAVPPEW WEIFVGRKLP RTIKLDSRIQ TFGVSKAVTP IAGTDMKLVS ISFMFDYQYD
DYPSELNIFF HAKYTKDPPI VKITIQRPDG LTLEIPRFSL RAPNDSLYYS ISEEVRKALA
LYAATKYGAN VSDLLDQLEL TFGKYSREGL EKGNLPVEKG IYRMNIEATC FGEDSDLEAK
VVIYGQVYGP AGTDNLRRPL EIALLWGAPV ALAFGLTASL VTSMLQMIIA TIGAWYGGVV
DSVIQRITEV YMILPFLPFL IIIAAFYKVD IWVILTVVIV LSIFGAGIKS TRALVLSIKE
YPYIEAAKAY GASDWRIIFL YIIPKIIPPI VPGLIGAVPG YVFLEAALSF LGLGDPFLPT
WGKVLNDAYN GGALYRGYYY WVLEPSILLM LTAFAFAFLG FALDRIVNPR LREM
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