| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0145 |
|---|
| Symbol | |
|---|
| ID | 4600637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 120098 |
|---|
| End bp | 121093 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639772899 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_919558 |
|---|
| Protein GI | 119719063 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGAGG ATAAGGTTAT ACTGAAGGCG GAAAACCTGA AGAAGTGGTT CACTGTTCGG
AGAGGTCTCT TCGGAGGCAC AGTGGAAGTA AAGGCGCTTG ACGGAGTTTC CTTCGAGTTG
AGGGCAGGCG AAGCCGTATC GCTCGTCGGC GAGTCGGGTA GCGGGAAGAC GACGCTGGGC
AAGACTATCC TCCGCCTCTA CGAGCCCACG GACGGTAAGC TCGTGTTCAA AGGTAGGGAC
ATAACGCACA CGCCCGAGAA GGAGCTAATG TGGTACAAGA GGGAGACCGG GCTCGTGCAG
CAGGATCCAT ACGGGGCCAT GCCGTCCTTC ATGAACATCT ACCGCATCCT CGAGGAACCC
CTAATCATAC ACAAGGTCGG GAGCAAGGAG GAGAGGGCTG AAATGGTTTT CAAGGCCCTC
GAAGAGGTAA GGCTCACCCC GGTAGAAGAT TTTGCGTACA AGTACCCGCA CATGCTTAGT
GGCGGCCAGC TCCAGAGAGT AGCGATAGCG AGGGCGCTCA TACTCAAGCC GAGCCTTGTC
GTAGCCGATG AGCCGGTATC GATGCTCGAC GCCTCCGTAA GGGTTGAGAT CCTCACGTTG
ATGAGGGACC TGCAAGAGAA GAGGAATATT AGCTTCATCT ACATCACGCA CGACCTATCG
ACGACGAGGT ACTTCAGCGA GTGGATCTTC ATAATGTACG CCGGCCACAT AGTGGAGAGA
GCCCCAACGA AGACCCTACT CAGGAACCCG TTGCACCCGT ACACGCGCGC CTTGCTCTCG
GCAATACCCG ACCCAGACCC CGAGAATAGG AAGAGGTACA GGGAGGTCCC GCCAGGAGAG
CCGCCGAGCC TCGTGAACCC GCCGCCCGGG TGCAGGTTTG CGCCCAGGTG CCCCTTCGCG
ACGAGCAGGT GCAGGAGCGA GGACCCGCCC GAAGTGGAGG TCGAGCCAGG CCACTACGTT
AAGTGTTGGC TCTTCGCCGG AGAAGCGAAG GCTTAG
|
|---|
| Protein sequence | MSEDKVILKA ENLKKWFTVR RGLFGGTVEV KALDGVSFEL RAGEAVSLVG ESGSGKTTLG
KTILRLYEPT DGKLVFKGRD ITHTPEKELM WYKRETGLVQ QDPYGAMPSF MNIYRILEEP
LIIHKVGSKE ERAEMVFKAL EEVRLTPVED FAYKYPHMLS GGQLQRVAIA RALILKPSLV
VADEPVSMLD ASVRVEILTL MRDLQEKRNI SFIYITHDLS TTRYFSEWIF IMYAGHIVER
APTKTLLRNP LHPYTRALLS AIPDPDPENR KRYREVPPGE PPSLVNPPPG CRFAPRCPFA
TSRCRSEDPP EVEVEPGHYV KCWLFAGEAK A
|
|---|
| |