Gene Tpen_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0141 
Symbol 
ID4602184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp116663 
End bp117373 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content58% 
IMG OID639772895 
ProductHhH-GPD family protein 
Protein accessionYP_919554 
Protein GI119719059 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCTT GCCTCCACGA GCCTAGGGGC TACGAGCTCG GCGACGAGAT ACTCGCACGC 
CTGAAGGGGG CCTTCTCCTT GGGGAGGGGG GAGTTCGTGG CGCTTGACGT TGCGAGGAGG
GGGGACTTCT TCGGGGTTCT CGTGGCAACG ATAATCTCCC AGAACACGAA CGAGAATAAC
ACCTTGAAGG CTTTCGCCTC CCTCGAGGAG AGGGTCGGAG TTGAGTGCGA AAAGATCAGG
AAAGCAGGGC TAAGCGAGCT CGCCGAGGCT ATACGGCCGG CAGGGTTGCA AGAGCAGAAA
GCCAAGGCGA TAAAGCAGGT TGCCTCTCTG CTTTACGAGA AGTATGGATG CGACATCGGT
AAGCTTCTAT CTAGGGGTGT CGAGGAGGTT ATCCGGGAGC TTAAACAGAT CGAAGGCATT
GGCGACAAGA CGATCGACGT TCTCCTCGCG AACTACGGCT ACCCCGTGCT CCCGATAGAC
ACTCACGTGA GGAGAGTCTC CGTAAGGCTC GGCTTGGCAC GCCCTGGTAG CTACAGGGCT
ATGCAAAAAA GCCTCCACGG CTTCTTCAGA GAAGAGGCAC GCCTAGACGC GCACCTCTAC
CTGATAAAGC TGGGTCGAAC CCTCTGCAGG GCGAAAAACC CGCTATGCGA TGAGTGCCCC
CTCTCGGACC TGTGCTGCTA CTACAGGACT AGCCGCGCTC CACATAGCTG A
 
Protein sequence
MNSCLHEPRG YELGDEILAR LKGAFSLGRG EFVALDVARR GDFFGVLVAT IISQNTNENN 
TLKAFASLEE RVGVECEKIR KAGLSELAEA IRPAGLQEQK AKAIKQVASL LYEKYGCDIG
KLLSRGVEEV IRELKQIEGI GDKTIDVLLA NYGYPVLPID THVRRVSVRL GLARPGSYRA
MQKSLHGFFR EEARLDAHLY LIKLGRTLCR AKNPLCDECP LSDLCCYYRT SRAPHS