Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0141 |
Symbol | |
ID | 4602184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 116663 |
End bp | 117373 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639772895 |
Product | HhH-GPD family protein |
Protein accession | YP_919554 |
Protein GI | 119719059 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTCTT GCCTCCACGA GCCTAGGGGC TACGAGCTCG GCGACGAGAT ACTCGCACGC CTGAAGGGGG CCTTCTCCTT GGGGAGGGGG GAGTTCGTGG CGCTTGACGT TGCGAGGAGG GGGGACTTCT TCGGGGTTCT CGTGGCAACG ATAATCTCCC AGAACACGAA CGAGAATAAC ACCTTGAAGG CTTTCGCCTC CCTCGAGGAG AGGGTCGGAG TTGAGTGCGA AAAGATCAGG AAAGCAGGGC TAAGCGAGCT CGCCGAGGCT ATACGGCCGG CAGGGTTGCA AGAGCAGAAA GCCAAGGCGA TAAAGCAGGT TGCCTCTCTG CTTTACGAGA AGTATGGATG CGACATCGGT AAGCTTCTAT CTAGGGGTGT CGAGGAGGTT ATCCGGGAGC TTAAACAGAT CGAAGGCATT GGCGACAAGA CGATCGACGT TCTCCTCGCG AACTACGGCT ACCCCGTGCT CCCGATAGAC ACTCACGTGA GGAGAGTCTC CGTAAGGCTC GGCTTGGCAC GCCCTGGTAG CTACAGGGCT ATGCAAAAAA GCCTCCACGG CTTCTTCAGA GAAGAGGCAC GCCTAGACGC GCACCTCTAC CTGATAAAGC TGGGTCGAAC CCTCTGCAGG GCGAAAAACC CGCTATGCGA TGAGTGCCCC CTCTCGGACC TGTGCTGCTA CTACAGGACT AGCCGCGCTC CACATAGCTG A
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Protein sequence | MNSCLHEPRG YELGDEILAR LKGAFSLGRG EFVALDVARR GDFFGVLVAT IISQNTNENN TLKAFASLEE RVGVECEKIR KAGLSELAEA IRPAGLQEQK AKAIKQVASL LYEKYGCDIG KLLSRGVEEV IRELKQIEGI GDKTIDVLLA NYGYPVLPID THVRRVSVRL GLARPGSYRA MQKSLHGFFR EEARLDAHLY LIKLGRTLCR AKNPLCDECP LSDLCCYYRT SRAPHS
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