Gene Tpen_0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0138 
Symbol 
ID4602181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp114279 
End bp115442 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content55% 
IMG OID639772892 
Producthypothetical protein 
Protein accessionYP_919551 
Protein GI119719056 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGTTCC CAAGGATATA CATAGGGACG TCTGGATGGG ATTACGACGA CTGGCTCGAC 
GTGTTTTATG AGAGCGAAAG GGGAATGTTC ACATACTATG CGAGGTTCTT TAACACCGTC
GAGATAAACT CCTCTTTCTA CAGCTTGCTC GGCGAGAAGT TCTACAAGGG ACTTGCGGAG
GCGGCTCCGG AGGGCTTCGT ATTCTCGCTG AAGATGTACC AGGGAATAAC CCACAAGAGG
CTCCTCAACC CGAGGCTCGT CGAGAAGGAA CTCGACTTCT TCCTTAAGTC CATAGAGCCC
CTTAGGGCTG CCGGGAAGCT CGGGGCAGTG CTGATACAGA TGCCTCCGAG AAGCCGGCGG
GAAATACCCT GGTTCAACGA GTTCCTGGAC ATGCTTCCCA GCAACGTTCG CTTCGCCGTG
GAGTTTAGGG ATGAGAGCTG GCTCTCGGAA GACATCTTCA AGAGGCTTGC CGACAGGAAT
ATCGCGTACA CCGTTGTCGA CGAGCCGCTA CTCCCGCCCG TCGTCAGGAT AACGGCGGAC
TTCGGGTACT TCAGGTGGCA CGGAAGGGGG GAAAGACCCT GGTACTACTA CCACTACTCG
CTGGAAGAGT TGAAAGGCTG GGCTTCGAAG ATCTCAGAGG TCATTGGAGA GGTCAAAATG
CTACTGGGCT ACTTCAATAA CCACTTCCGC GGCTTCGCCC CGCATAATGC TCTCCAAATG
GTCGTGTTGC TGGGTATTGC GAACAAGAGG CAACGGGAGA AGCTCGAAGA GATGGAGAAG
TACTTCGCGT CGGCGCCACG GAAATACGAG AGGGAGCTCC AGGAGGCACT CTCCTCCGGT
GATCTCGACA AGGCGCTTAG ACTGCTTGCC GGCGAGAGGC GCTTCGAGAG GGCTACCGGG
ATAAGCGACT CAGAGGTGAA GTATACGCTT CAGGGAGGAG TTCTAAGGGG CACAGTTAAA
CAGTACTTCG TGGGGGTTGA CCCCGGCGGC AGGAGGATCG TCCACGACTG CGAAGACTGG
AGGAAATCCC TCGAAACAAA GAGACTCTGC AAGCACATCG TGAAGCTCTT CCAGGTTTTG
CCGAGGGAAT ACTCACTGAA CGTCCTCAGA GACTTCGCGG AGAACATGGA CGAGTGGACC
TTCGAGTACG GGAGAAGCAT TTAG
 
Protein sequence
MLFPRIYIGT SGWDYDDWLD VFYESERGMF TYYARFFNTV EINSSFYSLL GEKFYKGLAE 
AAPEGFVFSL KMYQGITHKR LLNPRLVEKE LDFFLKSIEP LRAAGKLGAV LIQMPPRSRR
EIPWFNEFLD MLPSNVRFAV EFRDESWLSE DIFKRLADRN IAYTVVDEPL LPPVVRITAD
FGYFRWHGRG ERPWYYYHYS LEELKGWASK ISEVIGEVKM LLGYFNNHFR GFAPHNALQM
VVLLGIANKR QREKLEEMEK YFASAPRKYE RELQEALSSG DLDKALRLLA GERRFERATG
ISDSEVKYTL QGGVLRGTVK QYFVGVDPGG RRIVHDCEDW RKSLETKRLC KHIVKLFQVL
PREYSLNVLR DFAENMDEWT FEYGRSI