| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0135 |
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| Symbol | |
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| ID | 4602178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 110293 |
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| End bp | 111849 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639772889 |
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| Product | Alpha-amylase |
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| Protein accession | YP_919548 |
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| Protein GI | 119719053 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGCACG TAGTATTCAT GTTCGAGGTT CACCAGCCCT ACAGGCTCAG CAGGAACATC
CGAGGCACCC TCTCAGAGCT TACGGCGAGG AAAGGGAAGA TAACCGCCGA GGACCTGGAA
AGGGTTTACT TCGACGACGA GCTTAACAGA AGGATATTCG AGAGAGTCTC CAAGAGGTGC
TACTTACCGG CGAACAACGT CATAAGAGAT ATGGTGGAGT TCTTCAAGGA CTCGGGTAAA
CCGTTCAAGG TGTCATACAG CCTATCGGGA GTACTGTTGG AACAGGCGGA GAAATGGTAC
CCGGAGGTTA TAGAGAGCTT TAGGTCCCTC GCTAAGACTG GCATGGTCGA GTTCCTCGAT
CAAACGTACT ACCACAGCCT GGCCTTTCTC TTCGCTGAGG AGGAGCTTCT GGAGCAGGTA
AGGGAGCATA GGGAGGCTTT GCGGAAACAC TTGGGCGTCG AGCCCACCGC TGTGGAGAAC
ACCGAGTTCA CGTACAACAA CTACCTCGCG TGCCTCTTCG ACAAGCTGGG CTACAAGGTA
ATCCTAACCG AGGGTGTTGA GAGGGTTCTC GGGTGGAGGA GCCCCAACTA CCTCTACAAG
GCTAAAGGGT GCAACATACG CGTGCTGATG AGGAACTACC GCCTCTCCGA CGACATAGGT
TTCCGCTTCG GGGCTCGATG GTGGAGCGAG TACCCCCTCA CGGCGGACAA GTACTCGGCG
TGGCTCTCCG CGACCCCGGG CGAGGTCATC CTGGTAGCCA TCGACTACGA AACCTTCGGC
GAGCACTTCC CGGCGGAGAC GGGGATCTTC GAGTTCCTCA GGTGGCTTCC AGGAGAGATT
CTAAAGTGGG GGAACCTCGT GACGTCCACG CCGAGCGAGG TTGCCGAGAG GCTAACCCCC
AGGGACGAGG TGGACGTACC GGTGGAGTCG ACTATCTCCT GGGCGGATCT TGAGAGGGAC
CTCTCAGCGT GGATCGGGAA CTTCATGCAG AACAACGCTT TTACGAGGAT GAAGGACCTT
TGGTTGCAAA TAAAGGCTGT CCGGGACCGC GGACTCGAGA GGCTGTGGAA ACTGCTGTCG
ATAAGCGATC ACTACTACTA CATGTCCACC AAGGGTGGAG GACCCGGGGA CGTGCATTCC
TACTTCAGCC CCTACGGGAG CCCCTTTGAA GCCTACATGT TCTTCTCGGA GGCTCTCGGG
GACCTCGAGA CCAGGACCCT ACTGAGGCTT GAGAGCGACG AGACCGCGCG GTTAAGGTAT
GCCTGGATGA AGGATGTCCC ACGCGAGAAA GTCTTCGCTT TCTACAGGGC GCCGGGGCAG
CCGCTGGGCA GGTACGCTTG GAACATGTTC TCGTTTATAA ACGCCCTCAG AGAGGTCCCG
CTGGAGAGCG TCCTGTTCCA CCAGGAGAGA GGCGACTTTG CGAGCTGGGT CGAGTACATA
GTGGGGGACC ACGAACTCGC GGAAAGACTT AGGCGCGTCG GGACGGGAGG ATCGGAGGAG
GTTCGCTCCA GGATCTTAGA GGTAATCGAG CGGAGAAGGG CTGAGATCTT TGGCTGA
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| Protein sequence | MKHVVFMFEV HQPYRLSRNI RGTLSELTAR KGKITAEDLE RVYFDDELNR RIFERVSKRC
YLPANNVIRD MVEFFKDSGK PFKVSYSLSG VLLEQAEKWY PEVIESFRSL AKTGMVEFLD
QTYYHSLAFL FAEEELLEQV REHREALRKH LGVEPTAVEN TEFTYNNYLA CLFDKLGYKV
ILTEGVERVL GWRSPNYLYK AKGCNIRVLM RNYRLSDDIG FRFGARWWSE YPLTADKYSA
WLSATPGEVI LVAIDYETFG EHFPAETGIF EFLRWLPGEI LKWGNLVTST PSEVAERLTP
RDEVDVPVES TISWADLERD LSAWIGNFMQ NNAFTRMKDL WLQIKAVRDR GLERLWKLLS
ISDHYYYMST KGGGPGDVHS YFSPYGSPFE AYMFFSEALG DLETRTLLRL ESDETARLRY
AWMKDVPREK VFAFYRAPGQ PLGRYAWNMF SFINALREVP LESVLFHQER GDFASWVEYI
VGDHELAERL RRVGTGGSEE VRSRILEVIE RRRAEIFG
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