Gene Tpen_0131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0131 
Symbol 
ID4600716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp106311 
End bp107033 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content54% 
IMG OID639772885 
Producthypothetical protein 
Protein accessionYP_919544 
Protein GI119719049 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.333529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTCT ACGTGGGTAG CTCTGGCTGG GTCTACGACT GGAACCCCGA CGGGCTCGCG 
TGGTATGCGT CGCAGAGCGG ATTTAACGCT GTAGAACTCA ACATGAGCTT CTACAGCTTC 
CCGAAGAGAA CAACCGTTGA GAAGTGGGCT GAAGAGTCCG AAGGCCTTAG GTGGTCTATA 
AAGGTTCACA GAAGCATCAC GCACGTAAGG CGTCTAAACG AGAAGTCCCA CGCCACCTGG 
AGCAAGTTCA GGGAGTTGTT TGAGCCCATA GAAGACAGGA TAGACTTCTA CCTCTTCCAG 
TTGCCACCCA GCATGGCGTT CACTCCTGAG GCTGCGAGCA GGGTAGCGGC CTACGCTAGC 
CTAGCTGAGA AGATAGCCGT GGAGCCTAGG CATAAGTCGT GGTTCAGAAA GGAGGTCTAC 
GAGTTCTTCG AGGAGAAGGG CGTGTTCTTC GTGACGCCCG ATTCGCCCCT CTTTGAAGGG 
TTACCTCCGG ACGGGGTTGT ATGCATACGC GGAGTTGTCT ACGTGAGGAT GCATGGGAGG 
CTCGCATGGT ACAACTACGG CTACTTGGAC GAGGAGCTAC GCGAGGTGGC GGAGAAGATA 
ATCTCGGCCA ACCCTCAGCG TGCCTACGTG TTTTTCAACA ATGACCACGA TATGCTGGGG 
GACGGTTTAA GGCTGAAAGA AATCCTTCTG GAGAGGGGTG TTTCCTTCCC TAAACCCTTC 
TAA
 
Protein sequence
MELYVGSSGW VYDWNPDGLA WYASQSGFNA VELNMSFYSF PKRTTVEKWA EESEGLRWSI 
KVHRSITHVR RLNEKSHATW SKFRELFEPI EDRIDFYLFQ LPPSMAFTPE AASRVAAYAS 
LAEKIAVEPR HKSWFRKEVY EFFEEKGVFF VTPDSPLFEG LPPDGVVCIR GVVYVRMHGR 
LAWYNYGYLD EELREVAEKI ISANPQRAYV FFNNDHDMLG DGLRLKEILL ERGVSFPKPF